Pairwise Alignments

Query, 455 a.a., tRNA modification GTPase TrmE (NCBI) from Rhodospirillum rubrum S1H

Subject, 489 a.a., GTP-binding protein from Pseudomonas simiae WCS417

 Score = 64.3 bits (155), Expect = 8e-15
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 15/160 (9%)

Query: 231 VAVVGAPNVGKSSLVNRLARREAAIVSDIAGTTRDIVEVALDLGGYPLVVADTAGLRETS 290
           +A+VG PNVGKS+L NRL R   AIV D++G TRD         G   ++ DT G+    
Sbjct: 5   IALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGISGDE 64

Query: 291 DGIEAEGVRRARARLAAADLTLAVSDGTVENGADDPAADLTGEAVLR-------VVTKRD 343
            G++ +   ++   +  AD+ L + D      A D    + GE + +       V  K D
Sbjct: 65  HGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAAD---QMIGEHLRKRNKRSYVVANKID 121

Query: 344 LLDP---RAVERWLARG-ALPVSTLTGEGL-DALEAALES 378
            +DP   RA    +  G A+P++   G G+   LE AL S
Sbjct: 122 NIDPELARAEFSPMGLGDAIPIAGAHGRGITQMLEIALSS 161



 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 5/117 (4%)

Query: 222 GERLRDGLQVAVVGAPNVGKSSLVNRLARREAAIVSDIAGTTRDIVEVALDLGGYPLVVA 281
           G   +DG+++A++G PNVGKS+LVNR+   +  IV D  GTTRD + +  +       + 
Sbjct: 188 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFERNEEKYTLI 247

Query: 282 DTAGLRETS---DGIEAEGVRRARARLAAADLTLAVSDGTVENGADDPAADLTGEAV 335
           DTAG+R+     + +E   V +    +  A++ + V D     G  D   +L G A+
Sbjct: 248 DTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMD--AREGVVDHDLNLLGFAL 302