Pairwise Alignments

Query, 478 a.a., Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 431 a.a., sensory histidine kinase in two-component regulatory system with PhoB (NCBI) from Escherichia coli BW25113

 Score =  177 bits (449), Expect = 6e-49
 Identities = 150/460 (32%), Positives = 216/460 (46%), Gaps = 51/460 (11%)

Query: 10  RLIGAAMLVCVPA--TAVLLGLTLWGRLSVGVALVAGVLIWTLTALLLRSILREFMVVSR 67
           RL+   +L C+PA       G   W  L    A V G+LIW    LL    L  ++ V R
Sbjct: 9   RLVLELLLCCLPAFILGAFFGYLPWFLL----ASVTGLLIWHFWNLLR---LSWWLWVDR 61

Query: 68  HIRGLGGRSEAGEGAAPTPRLEIAQGLLGAAQHLDRGWRRRTQALRDQLRSDEQVLNTLP 127
            +              P P     + LL     +    ++R + L + ++       +LP
Sbjct: 62  SM-------------TPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLP 108

Query: 128 DPLLMIAKEAVVTRANEAARSLFGR---DPAGQEIITLLRDPGVLDSVERVLAGGTAPRQ 184
           D +++  +E  +   N  A+ + G    +  GQ I+ LLR P       + L      R 
Sbjct: 109 DAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYP----EFTQYLKTRDFSRP 164

Query: 185 TIWVMPGAVEREFEVRATPLPSPSIDGSVALLGLHDITALRRLEQMRADFVANASHELRT 244
              V+     R  E+R  P     +     L+   D+T + +LE  R +F AN SHELRT
Sbjct: 165 LNLVLNTG--RHLEIRVMPYTHKQL-----LMVARDVTQMHQLEGARRNFFANVSHELRT 217

Query: 245 PLSSLIGFTETLSTSAKNDPEARERFLAIMLEQGRRMQRLIEDLLSLSRIEMEEHTPPDE 304
           PL+ L G+ E ++     +   RE+ L  M EQ +RM+ L++ LL+LS+IE       +E
Sbjct: 218 PLTVLQGYLEMMNEQPL-EGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNE 276

Query: 305 AVVLPGLIASVTRFLEIKAREKTMTLSVEAPPDLPPAIGDADQLSQIFQNLLDNAIKYGR 364
            V +P ++  V R  +  +++K  T + E    L  + G+ DQL     NL+ NA+ +  
Sbjct: 277 KVDVPMMLRVVEREAQTLSQKK-QTFTFEIDNGLKVS-GNEDQLRSAISNLVYNAVNHTP 334

Query: 365 PGTPVEVRLAVVERGPPAMPAGLRAPCLRVSVIDHGEGIAKAHLPRLTERFYRVDKARSR 424
            GT + VR   V  G               SV D+G GIA  H+PRLTERFYRVDKARSR
Sbjct: 335 EGTHITVRWQRVPHGA------------EFSVEDNGPGIAPEHIPRLTERFYRVDKARSR 382

Query: 425 ALGGTGLGLAIVKHVVVRHRGAMTIESDPGLGTTVSVFLP 464
             GG+GLGLAIVKH V  H   + IES  G GT  S  +P
Sbjct: 383 QTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIP 422