Pairwise Alignments

Query, 454 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  112 bits (280), Expect = 2e-29
 Identities = 86/297 (28%), Positives = 142/297 (47%), Gaps = 22/297 (7%)

Query: 151 LQQTLNALPVIALYGLLAASYTLIYALGRTILLVFGELAMIGAMACFAGVALFSGLGGLG 210
           LQ  ++ + V A+Y L+A  +T+IY     +    GE  M+G M   AGVA         
Sbjct: 5   LQFLVSGVTVGAVYALVALGFTIIYNASDVVNFAQGEFVMLGGMISVAGVA--------- 55

Query: 211 TAGV-VGGAVVFALLASAVHGDALRRLVLQPAAGRTPLALLVASFALAIVVQDYVRLSQD 269
            AG+ +  A + A+  +A  G AL    ++PA G   ++L++ +   +I ++   ++  D
Sbjct: 56  -AGLPLPLAALIAIALTAAIGVALNTFAIEPARGAPVVSLIIITIGASIFIRGVTQIVLD 114

Query: 270 AGDRLLPTLPGRT--HVLARAGEFVVAVTDFQLVLVGGAGIVLGALVWGMGRGRFGRCWR 327
            G   LP+  G    HVL         V    + +V GA  +  AL     R   GR   
Sbjct: 115 KGTHRLPSFSGDDPIHVLG------ATVLPQSMWVVAGAVAIFVALWLFFTRTLTGRAVL 168

Query: 328 AMAEDPQMATLCGVSKTRLWAICFALAATLAGLAGVVVLLRFGLANAF-MGAMLGFKALT 386
           A + +   A L G++   +  + FAL+A +  LAGV++     L  +F +G  L  K   
Sbjct: 169 ATSNNRLAAQLVGINTRFVMTLSFALSAAIGALAGVLITPI--LPTSFEIGISLALKGFA 226

Query: 387 AAVVGGIGRIQGAILGAVVIGGLETYWAAYFDMAWRDVAVFALLAAALVLRPQGLVG 443
           AA++GG+G  +GA+ G +++G +E   A Y    ++D   F ++ A L   P+GL G
Sbjct: 227 AAMLGGMGNPKGALAGGLLLGLMEALTAGYISSHYKDAVAFFVILAVLFAFPRGLYG 283