Pairwise Alignments

Query, 454 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  123 bits (309), Expect = 7e-33
 Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 18/299 (6%)

Query: 150 FLQQTLNALPVIALYGLLAASYTLIYALGRTILLVFGELAMIGAMACFAGVALFSGLGGL 209
           FLQ  L  + V  +YG +A  + +IY     +    GE  M+GAM C   V L      L
Sbjct: 4   FLQFALAGISVGVIYGAIAVGFNIIYNSSHVVNFAQGEFVMLGAMTC---VLL------L 54

Query: 210 GTAGVVGGAVVFALLASAVHGDALRRLVLQPAAGRTPLALLVASFALAIVVQDYVRLSQD 269
           G       A   A+ A+AV G  L  + ++PA     + L++ +   +I+++   R    
Sbjct: 55  GAGLPYPLAAFLAVAATAVVGLLLYDVAIRPAKNAPVIMLIIITIGASILIRGLARPIFG 114

Query: 270 AGDRLLPTL-PGRTHVLARAGEFVVAVTDFQLVLVGGAGIVLGALVW-GMGRGRFGRCWR 327
            G   LP + PG +  +  A    V      +V+ G  G VL  L+W  M +   G+   
Sbjct: 115 TGVASLPAVVPGASISIGGA----VVQPQSLIVVAGTLGAVL--LLWLFMRKTLLGKGLI 168

Query: 328 AMAEDPQMATLCGVSKTRLWAICFALAATLAGLAGVVVLLRFGLANAFMGAMLGFKALTA 387
           A + DP  ATL G+  + +  + F ++A+L  ++G+++     LAN  MG +L  K   A
Sbjct: 169 AASSDPMAATLMGIRVSNIVRLSFLISASLGAVSGILIA-PIALANYEMGTLLALKGFAA 227

Query: 388 AVVGGIGRIQGAILGAVVIGGLETYWAAYFDMAWRDVAVFALLAAALVLRPQGLVGLAE 446
           A++GG+G I GA+LG +++G  E   A Y    ++D   F ++  AL   P GLVG  E
Sbjct: 228 AILGGMGSIPGAVLGGLLVGLSEAMSAGYISSDYKDATAFVVIMLALFFFPNGLVGSGE 286