Pairwise Alignments

Query, 544 a.a., Major facilitator superfamily MFS_1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 106/477 (22%), Positives = 190/477 (39%), Gaps = 41/477 (8%)

Query: 49  IQGSLGATLTETSWLIAAYMAPNVSLTILLTKIRIQFGLRRFAELSLIIFAVTSLLHLVI 108
           I G+LG +  + +W+I ++   N     L   +  +FG  +    + ++F + S L  + 
Sbjct: 42  ISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGEVKLFIWATLLFVLASFLCGIA 101

Query: 109 FDLWTALPIRFLAGMAAAPVSTLGFLYMLEAFPPAKKLTWAVSLSLTCSAATPMVARVIS 168
             +   +  R L G+ A P+  +    ++  +PPAK+   A++L    +   P+   ++ 
Sbjct: 102 QSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKR-GMALALLAMVTVVAPIAGPILG 160

Query: 169 PVLLDLGQWQQLYTLELGLALLAFSVVFLLPLTPLPYAKVLHWRDFITYPLVAIGFGLLA 228
             + D   W  ++ + + + L A +VV    +   P        D+I    + IG G L 
Sbjct: 161 GWITDSYSWPWIFFINVPIGLFAAAVV-RQQMRTRPVVTSRQPMDYIGLLTLIIGVGALQ 219

Query: 229 VVLALGRFYWWFEAPWIGICLAIAALCIGGAAAVELHRDTPLLNIRWLTSPEIATLALTL 288
           VVL  G    WFE+ +I +   I+ + +      EL    P++N+R              
Sbjct: 220 VVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELTDRHPVVNLRLFVHRN-------- 271

Query: 289 LIFRIVLAEQTSGAIGLFQTLGLLNEQSRTLYLILLAATLAGGLICGLTLTLARVPLF-- 346
             FRI       G  G F    +L +  +T   +   AT AG  +  + L    +  F  
Sbjct: 272 --FRIGTIVLVGGYAGFFGINLILPQWLQT--QMGYTATWAGLAVAPIGLLPVIMSPFVG 327

Query: 347 -----------HGIALICIAGGAVMDGHATALTRPETMYFSQALIAFGGALFLPPAMHSG 395
                       G+A + I     M    T+    + +   Q  +  G ALF  P + S 
Sbjct: 328 KYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGIGVALFFMPTL-SI 386

Query: 396 LVKTFKQGPMFITSFIAVFLFTQSIGGLMGSALFGSLVTLREKVHSAHLVEQIQLTNPIV 455
           L+       +   S +A FL  +++GG   ++L   +   R   H A+L E I   +P  
Sbjct: 387 LLSDLPPHQIADGSGLATFL--RTLGGSFAASLTTWIWIRRADQHHAYLSEHISQFDPTT 444

Query: 456 ADRLHTLAGAYHPLLSDPQQLMTEGMALLSQQVTREATVLAYNDAFLLLAAIASAFL 512
              L  L GA       PQ       A L Q +  +A +++  D F L++ + +  +
Sbjct: 445 RHTLEQLGGA------SPQ-----SYAQLEQILNGQAYMMSTVDYFTLMSWVFAGLI 490