Pairwise Alignments

Query, 544 a.a., Major facilitator superfamily MFS_1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 504 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

 Score =  115 bits (289), Expect = 3e-30
 Identities = 124/499 (24%), Positives = 215/499 (43%), Gaps = 30/499 (6%)

Query: 36  GLGMNLIAVNTLQIQGSLGATLTETSWLIAAYMAPNVSLTILLTKIRIQFGLRRFAELSL 95
           G+ +++ +    +I+GSLGA+  E SW+  AY+   + +  L   +   F LRR      
Sbjct: 26  GMNVHVTSAALPEIRGSLGASFEEGSWISTAYLVAEIVMIPLTAWLVDVFSLRRVMWTGS 85

Query: 96  IIFAVTSLLHLVIFDLWTALPIRFLAGMAAAPVSTLGFLYMLEAFPPAKKLTWAVSLSLT 155
           +IF + S+      +L   + IR + G A A +  L F  ++    PA K+   ++L   
Sbjct: 86  LIFLIASVACSWAPNLEAMIVIRVIQGAAGAVLIPLSFQLIITEL-PASKMAMGMALFSL 144

Query: 156 CSAATPMVARVISPVLLDLGQWQQLYTLEL--GLALLAFSVVFLLPLTPLPYAKVLHWRD 213
            ++        I   L D   W+ ++ L+L  G+ALL  ++ + +   P+   ++L   D
Sbjct: 145 ANSVAQAAGPSIGGWLTDAYSWRWIFYLQLFPGIALL-LAIAWSIEAKPMK-LELLRKGD 202

Query: 214 FITYPLVAIGFGLLAVVLALGRFYWWFEAPWIGICLAIAALCIGGAAAVELHRDTPLLNI 273
           ++    + IG G L +VL  G    WF +P I     +AA+ +      +L      +N+
Sbjct: 203 WLGIAAMVIGLGGLQIVLEEGGRLDWFGSPLIVGMSVVAAIALVVFVVTQLFGQRAFINL 262

Query: 274 RWLTSPEIATLALTLLIFRIVLAEQTSGAIGLFQTLGLLNEQSRTLYLILLAATLAGGLI 333
           R L        ++ + IF       T G + L     L   Q  + + + +A    G + 
Sbjct: 263 RLLGHYNFGVASVAMFIF----GAATFGLVFLVPNY-LSQLQGFSAHDVGVALIAYGVVQ 317

Query: 334 CGLTLTLARVPLFHGIALICIAGGAVMD-----GHATALTRPETMYFSQALIAFGGALFL 388
             L   + R+  +     +  +G  +M      G   +    + +     ++   G  F+
Sbjct: 318 LLLAPLMPRLMGWTSAKFMVASGFLIMALGCWLGAGLSADSADNVIIPSTVVRGIGQPFI 377

Query: 389 PPAMHSGLVKTFKQGPMFITSFIAVFLFTQSIGGLMGSALFGSLVTLREKVHSAHLVEQI 448
             A+    V    +      S  AVF   +++GG +G+A    LV  RE+ HS  + EQ+
Sbjct: 378 MVALSVLAVAGLDKREAGSAS--AVFSMLRNLGGAIGTAGLTQLVATRERFHSERIHEQV 435

Query: 449 QLTNPIVADRLHTLAGAYHPLLSDPQQLMTEGMALLSQQVTREATVLAYNDAFLLLAAIA 508
            L  P V  R++    ++ P    PQQ M E    L   + REA ++AY+DAF L     
Sbjct: 436 TLFEPSVQARINQTVQSWLP----PQQQMLEA---LEATIRREAYLMAYSDAFYL----- 483

Query: 509 SAFLAALGLHMAYRRLRGR 527
            A LA +G  +A   LR R
Sbjct: 484 -ACLALVGCALAALLLRAR 501