Pairwise Alignments

Query, 544 a.a., Major facilitator superfamily MFS_1 (NCBI) from Rhodospirillum rubrum S1H

Subject, 513 a.a., putative Multidrug efflux MFS transporter from Pseudomonas putida KT2440

 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 134/522 (25%), Positives = 213/522 (40%), Gaps = 45/522 (8%)

Query: 5   SSPPAPPAAPPMSTGRSTIYIAASVLLW-MTQGLGMNLIAVNTLQIQGSLGATLTETSWL 63
           ++ PAP A    + G   +     VLL  +  GL  ++  ++   I+G++G    E +WL
Sbjct: 12  AAAPAPAAPAQTAFGLQVVVGLFGVLLAVLCAGLNESVTKISLADIRGAMGIGADEGAWL 71

Query: 64  IAAYMAPNVSLTILLTKIRIQFGLRRFAELSLIIFAVTSLLHLVIFDLWTALPIRFLAGM 123
           +A Y A +VS       +   F LRRF   ++ +FAV  LL     +L + + +R L G 
Sbjct: 72  LAVYSAASVSAMAFAPWLATTFSLRRFTMSAVGLFAVLGLLQPFAPNLHSLMLLRVLQGF 131

Query: 124 AAAPVSTLGFLYMLEAFPPAKKLTWAVSLSLTCSAATPMVARVISPVLLDLGQWQQLYTL 183
           AA  +  +     L   PP  K+      +LT +   P +   ++ +  +   WQ  +  
Sbjct: 132 AAGALPPMLMSVALRFLPPGIKVYGLACYALTATFG-PNLGTPLAGLWTEYVGWQWAFWQ 190

Query: 184 ELGLALLAFSVV-FLLPLTPLPYA--KVLHWRDFITYPLVAIGFGLLAVVLALGRFYWWF 240
            +  +LLA   V + LP  PL     K   WR  +   L AI   +L   L+LG  + WF
Sbjct: 191 IILPSLLAMVCVGWGLPQDPLRLERFKQFDWRG-VLLGLPAISCTVLG--LSLGDRWGWF 247

Query: 241 EAPWIGICLAIAALCIGGAAAVELHRDTPLLNIRWLTSPEIATLALTLLIFRIVLAEQTS 300
           ++P I   L    L +      E     P   +R L    ++   +TL    +VL+   S
Sbjct: 248 DSPLICWLLGGGLLLLVLFMYNEWSEPLPFFQLRLLQRRNLSFALVTLAGVLVVLSGVGS 307

Query: 301 -GAIGLFQTLGLLNEQSRTLYLI-----LLAATLAGGLICGLTLTLARVPLFHGIALICI 354
             +  L Q  G    Q+  L ++     L+A  L   L C +     R  L  GI L  +
Sbjct: 308 IPSAYLAQIQGYRPAQTSPLMMLVAMPQLIALPLTAAL-CNIRAVDCRWVL--GIGLAML 364

Query: 355 AGGAVMDGHATALTRPETMYFSQALIAFGGAL-FLPPAMHSGLVKTFKQGPMFITSFIAV 413
           A   V     T+       Y    L  FG  +  LP  M S    T ++GP F +S+   
Sbjct: 365 AVSCVGSSLLTSEWIRGDFYPFYLLQVFGQPMAVLPLLMLSTNGMTPQEGP-FASSW--- 420

Query: 414 FLFTQSIGGLMGSALFGSLVTLREKVHSAHLVEQIQLTNPIVADRLHTLAGAYHPLLSDP 473
           F   + +  ++   L   L TLR   HS HLV+ +                         
Sbjct: 421 FNTVKGLAAVIAGGLLDVLGTLRRHFHSNHLVDSL-----------------------GN 457

Query: 474 QQLMTEGMALLSQQVTREATVLAYNDAFLLLAAIASAFLAAL 515
             L+    A L++++  +A VL   D +L+LA IA A +  +
Sbjct: 458 APLVDGNAAGLAKRIHDQAQVLTSADLYLVLACIAVALICLI 499