Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 385 a.a., acetylornithine deacetylase from Pseudomonas simiae WCS417

 Score = 97.1 bits (240), Expect = 8e-25
 Identities = 106/349 (30%), Positives = 147/349 (42%), Gaps = 40/349 (11%)

Query: 66  NLYARRGGAG-PCFGFAGHTDVVPA-GDGWSRPPFGAEVVDGALVGRGAADMKGGIACFV 123
           NL A  G A  P    +GHTDVVP  G  WS  PF     DG L GRG ADMKG IAC +
Sbjct: 51  NLLATIGPAEVPGIVLSGHTDVVPVEGQRWSVAPFDLTEKDGKLYGRGTADMKGYIACVL 110

Query: 124 AAVARLISGPDSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLV 183
           A V  L+         S   P   + + ++ DEE   L G R ++E       +  LC++
Sbjct: 111 ACVPALVKA-------SLRMP---VHIALSYDEEVGCL-GVRSLIERFHEQPVKPLLCVI 159

Query: 184 GEPTNPEGLGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLL--LAET 241
           GEPT  + +     +G +G L     + G A H AY     N +   + L   L  L ET
Sbjct: 160 GEPTELKPV-----LGHKGKLAMRCHVHGAACHSAYAPAGVNAIEYAACLISELVRLGET 214

Query: 242 L---DDGTAHFQPS-SLQLTSIDVGNPAANVIPAKATLRFNIRF----NDRHSGESLSAW 293
           L         F P+ S   T +  G  A N++P   +  F +R     +       L A+
Sbjct: 215 LKAPQHLDQRFAPAFSTVQTGLINGGKALNIVPQDCSFDFEVRSLPAQDPWQVARQLQAY 274

Query: 294 IRARCLAA--CDGDESGFSLVLEHSGDAFLTPPGPLSDLIATACQAVT---GRRPELSTS 348
                L A     ++S  SL          + PG  + L + A + V    G R   + +
Sbjct: 275 AEQTLLPAMRAVSEQSAISL------SELSSYPGLATSLESQAAEWVAQFCGSREFATVA 328

Query: 349 GGTSDARFIRSHCPVAEFGLVGRTM-HKPDERVAVADLEALSEIYRRVL 396
            GT    F ++  P    G       HKPDE ++VA L+A   +  RVL
Sbjct: 329 FGTEGGLFDQAGIPTVVCGPGSMEQGHKPDEFISVAQLQACDRMLARVL 377