Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 388 a.a., Uncharacterized deacetylase from Variovorax sp. SCN45

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 98/385 (25%), Positives = 158/385 (41%), Gaps = 39/385 (10%)

Query: 17  LALARALVACPSVTPR-DAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGAG 75
           L LA+ LV   +V+   +   +D  +S L ALG +  R+ + AE  +   NL+A  G   
Sbjct: 10  LLLAQTLVRMNTVSANSNLELIDFAQSHLKALGVQS-RITYNAERTKA--NLFATLGEGK 66

Query: 76  PCFGF-AGHTDVVP-AGDGWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGP 133
           P     +GHTD VP  G  WS  P  A V +  L GRG+ADMK  IA  +A   R +   
Sbjct: 67  PAGVIVSGHTDTVPWDGQDWSVDPLSAIVQNERLYGRGSADMKSFIAIALANAGRFLES- 125

Query: 134 DSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLG 193
                    D   ++    + DEE     G ++++  M  AG     C+VGEPT+     
Sbjct: 126 ---------DSPFAVHFAFSYDEE-VGCFGVKELIADMRDAGINPLACIVGEPTSM---- 171

Query: 194 DMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLL--LAETLDDGTAHFQP 251
            +  I  +G       + G+  H +    + N +   + + G +  +AE  +     ++ 
Sbjct: 172 -VPAIAHKGVYRYKCCVRGKEAHSSLTPKSVNAIEMAARVIGKVRDMAEDFERNEPRYEG 230

Query: 252 SSLQLTSIDV----GNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDES 307
             +  ++  V    G  A NV+P  A  R+   F D  + ++    ++A  +A     E 
Sbjct: 231 FDVPFSTASVGQFHGGIADNVVPRDAEFRY--EFRDLPTADAKR--MQADVMAYAGSIEP 286

Query: 308 GFSLVLEHSGDAFLT----PP--GPLSDLIATACQAVTGRRPELSTSGGTSDARFIRSHC 361
               V   +G +F T    P   G   + +    Q + G       + GT    F  +  
Sbjct: 287 AMKKVAPDAGFSFETICEIPSFLGAADNPVTKLAQRLAGEEGTTLVAFGTEAGLFKNAGI 346

Query: 362 PVAEFGLVG-RTMHKPDERVAVADL 385
           P    G       H+PDE V++  L
Sbjct: 347 PTVVCGPGSIEQAHQPDEFVSLEQL 371