Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 380 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Sphingobium sp. HT1-2

 Score =  351 bits (900), Expect = e-101
 Identities = 202/382 (52%), Positives = 245/382 (64%), Gaps = 18/382 (4%)

Query: 15  DPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYA-RRGG 73
           D LALA  L+ACPSVTP        LE+ L+ LGF   R   G      V+NL A R  G
Sbjct: 9   DALALAERLLACPSVTPAVGDVFAELEAMLVPLGFTVDRFVSGVAPDGPVENLLAWRTTG 68

Query: 74  AGPCFGFAGHTDVVPAGDGWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGP 133
           AGP F FAGH DVVP G GW+  PF   V    L GRGA DMKG IA FVAA+  L   P
Sbjct: 69  AGPHFAFAGHLDVVPPGHGWASDPFTPVVRGDLLYGRGAVDMKGAIAAFVAALHEL---P 125

Query: 134 DSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLG 193
           D+          G+I+L+ITGDEEGPA +GT  +++ M   G   D+CLVGEPT+   LG
Sbjct: 126 DAL--------PGTISLIITGDEEGPATYGTLALMDRMVAHGLHPDMCLVGEPTSSARLG 177

Query: 194 DMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQPSS 253
           D++KIGRRGS+   + + G  GHVAYPHLADNP+  L  +   + AE LD GT  FQPS+
Sbjct: 178 DVVKIGRRGSVNMWIKVAGTQGHVAYPHLADNPIPALVRILAKIDAEVLDTGTDWFQPSN 237

Query: 254 LQLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDESGFSLVL 313
           +++T ++VGNPA NVIPA AT R +IRFND+HSG SL   I A  +AA +G     S+  
Sbjct: 238 IEITDLEVGNPAHNVIPASATARISIRFNDQHSGASLIDRISA--IAASEGG----SVEA 291

Query: 314 EHSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIRSHCPVAEFGLVGRTM 373
           + SG+ FLT PG LS LI+ A + VTG   ELST+GGTSDARF+   CPVAEFGL   TM
Sbjct: 292 KISGEPFLTQPGTLSTLISDAIRDVTGLETELSTTGGTSDARFLSRLCPVAEFGLNNATM 351

Query: 374 HKPDERVAVADLEALSEIYRRV 395
           HK DE VAVADL  L+ IYR +
Sbjct: 352 HKLDEAVAVADLHDLTHIYRLI 373