Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 383 a.a., Succinyl-diaminopimelate desuccinylase from Pseudomonas putida KT2440

 Score =  287 bits (734), Expect = 4e-82
 Identities = 176/392 (44%), Positives = 229/392 (58%), Gaps = 22/392 (5%)

Query: 11  AELADPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYAR 70
           AEL+  L LA  L+  PSVTP DA     + + L A+GF+   +       E VDN +A 
Sbjct: 5   AELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRI-----EDVDNFWAT 59

Query: 71  RGGA-GPCFGFAGHTDVVPAG--DGWSRPPFGAEV-VDGALVGRGAADMKGGIACFVAAV 126
            G   GP   FAGHTDVVP G    W   PF A +  DG L GRGAADMKG +A  V A 
Sbjct: 60  HGSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIAS 119

Query: 127 ARLISGPDSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEP 186
            R +            +  G +A LIT DEEGPA HGT+ V+E ++   ER+D C+VGEP
Sbjct: 120 ERFVQ--------DYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEP 171

Query: 187 TNPEGLGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGT 246
           ++   LGD++K GRRGSL A +T+ G+ GHVAYPHLA NP+H  +     L AE  D+G 
Sbjct: 172 SSTTLLGDVVKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGN 231

Query: 247 AHFQPSSLQLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDE 306
           A F P+S Q+++++ G  A NV+P + T  FN RF    S ES    ++AR  A  D  E
Sbjct: 232 AFFPPTSFQISNLNSGTGATNVVPGELTALFNFRF----STESTVEGLQARVSAILDKHE 287

Query: 307 SGFSLVLEHSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIRS-HCPVAE 365
             +S+    SG  FLT PG L D +A + + VTGR  + STSGGTSD RFI +    V E
Sbjct: 288 LDWSVDWALSGLPFLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVE 347

Query: 366 FGLVGRTMHKPDERVAVADLEALSEIYRRVLV 397
            G V  T+H+ DER+  +DL+ L+EIY + LV
Sbjct: 348 LGPVNATIHQVDERILASDLDLLTEIYYQTLV 379