Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 379 a.a., succinyl-diaminopimelate desuccinylase from Magnetospirillum magneticum AMB-1

 Score =  449 bits (1156), Expect = e-131
 Identities = 236/383 (61%), Positives = 275/383 (71%), Gaps = 14/383 (3%)

Query: 15  DPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGA 74
           DP+ LA+AL+ CPSVTP DAGALDVL  AL  LGF C  +   A GG  + NLYAR G  
Sbjct: 5   DPVPLAQALIRCPSVTPEDAGALDVLAGALEELGFACHHIR-SATGGPEIRNLYARLGTE 63

Query: 75  GPCFGFAGHTDVVPAGDGWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGPD 134
            P   FAGHTDVVP G GW+  PF A +  G L GRG+ADMKG IACFVAAVARL+    
Sbjct: 64  APNLCFAGHTDVVPPGKGWTVEPFAAGIDQGRLFGRGSADMKGAIACFVAAVARLLEDGA 123

Query: 135 STGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLGD 194
                    P GS++LLITGDEEGPA+ GT KVL+W+   GER+D C+VGEPTNP  LGD
Sbjct: 124 ---------PKGSLSLLITGDEEGPAVDGTVKVLDWLAARGERIDCCIVGEPTNPRKLGD 174

Query: 195 MIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQPSSL 254
           M+KIGRRGSL   +T+ G  GH AYPHLADNP+ RL  +   L    LD+GT HFQ S+L
Sbjct: 175 MMKIGRRGSLNCRLTVFGTQGHSAYPHLADNPIPRLLDILRRLTEAPLDEGTPHFQASTL 234

Query: 255 QLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDESGFSLVLE 314
            LT++DVGNPA NVIPA+A   FNIRFND HSG SL  WIR   +A   G+     + +E
Sbjct: 235 ALTTVDVGNPATNVIPAEARAGFNIRFNDLHSGASLERWIR-DTVAQAGGE---VEIKVE 290

Query: 315 HSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIRSHCPVAEFGLVGRTMH 374
            SG++FLTPPG LSD +A A   VTG RPELSTSGGTSDARFI++HCPV EFGLVG+TMH
Sbjct: 291 VSGESFLTPPGALSDALAEAAFEVTGLRPELSTSGGTSDARFIKNHCPVVEFGLVGQTMH 350

Query: 375 KPDERVAVADLEALSEIYRRVLV 397
           K DE V+VAD+EAL+EIYRRVLV
Sbjct: 351 KSDEHVSVADMEALTEIYRRVLV 373