Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

 Score =  248 bits (632), Expect = 3e-70
 Identities = 154/396 (38%), Positives = 217/396 (54%), Gaps = 23/396 (5%)

Query: 13  LADPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRG 72
           +++ LAL++ L+  PSVTP DAG   ++   L ALGF+   + F     E   N ++ R 
Sbjct: 1   MSETLALSKDLINRPSVTPEDAGCQQMMMQYLEALGFKNEIMNF-----EDTSNFWSLRH 55

Query: 73  GA--GPCFGFAGHTDVVPAG--DGWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVAR 128
           G   GP F FAGHTDVVPAG  + W  PPF A   +G L GRGA+DMK  +A  + A  R
Sbjct: 56  GRTEGPVFVFAGHTDVVPAGPLENWHTPPFEATEKEGYLYGRGASDMKSSLAAMLVATKR 115

Query: 129 LISGPDSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTN 188
            +            +  GSI  LIT DEEGP ++GT +V+E +    + +D C+VGEP++
Sbjct: 116 FVK--------DYPEHIGSIGFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSS 167

Query: 189 PEGLGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAH 248
            E  GD+IK GRRGSLT  +T+ G  GHVAYPHLADN +H+       L     D G   
Sbjct: 168 SEQFGDVIKNGRRGSLTGFLTIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQF 227

Query: 249 FQPSSLQLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDESG 308
           F  +S Q+  I  G  A NVIP +  + FN R+    S E+    ++ + +A  D     
Sbjct: 228 FPATSFQIAIIKAGT-AGNVIPGEKYVEFNFRY----STETTHQELQQKVVAVLDKYNLE 282

Query: 309 FSLVLEHSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFI-RSHCPVAEFG 367
           + L  + +G+ FLT  G L      A +AV        T+GGTSD RFI ++   + E G
Sbjct: 283 YDLNWKLNGEPFLTDHGHLLTAARNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIG 342

Query: 368 LVGRTMHKPDERVAVADLEALSEIYRRVLVGFFEAP 403
            V +T+H+ +E V + DL+ L+E+Y ++LV     P
Sbjct: 343 PVNKTIHQINECVKIEDLDKLTEVYYQILVELLATP 378