Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 426 a.a., M20 family metallopeptidase from Dickeya dianthicola ME23

 Score = 77.4 bits (189), Expect = 7e-19
 Identities = 78/273 (28%), Positives = 111/273 (40%), Gaps = 36/273 (13%)

Query: 38  DVLESALIALGFRCVRL---------PFGAEGGERVDNLYARRGGAGPCFGFAGHTDVVP 88
           D++ES L  LGFR  R+         P G+  GERV+ L    G A        H D VP
Sbjct: 46  DLMESLLTPLGFRFQRMSVPDSLWRSPDGSARGERVNLLATLPGDAQENCNLYFHVDTVP 105

Query: 89  AGDGWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGPDSTGSISRHDPTGSI 148
            GDGW  PP         L+GRG+ADMKG I   +AA    +          R +P    
Sbjct: 106 PGDGWHYPPLALSQEGERLIGRGSADMKGTIVATLAA----LRAAQKYRLTLRFNP---- 157

Query: 149 ALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLGDMIKIGRRGSLTATV 208
            LL+  DEEG    G R + E     G  +            G    I  G  GSL   +
Sbjct: 158 VLLLCTDEEGGLYPGIRYLAEQRLFQGHMLSF--------NGGAAPRIWAGCFGSLDVVI 209

Query: 209 TLLGRAGHVAYPHLADNPLHRLSTLTGLLLA--ETLDDGTA------HF--QPSSLQLT- 257
            + GR+GH        N +     L   L+A    ++  T+      HF  +P + +LT 
Sbjct: 210 RVTGRSGHSGDSVDGINAIEESLPLMNALMALKRQVEQRTSAMPPPPHFAGKPLTSRLTL 269

Query: 258 SIDVGNPAANVIPAKATLRFNIRFNDRHSGESL 290
           ++  G    + +P +  L  N R+    S +++
Sbjct: 270 AVAQGGSKGSTLPERFELLVNRRYAPEESFDAV 302