Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 375 a.a., succinyl-diaminopimelate desuccinylase from Dickeya dianthicola ME23

 Score =  268 bits (686), Expect = 2e-76
 Identities = 158/383 (41%), Positives = 220/383 (57%), Gaps = 21/383 (5%)

Query: 17  LALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGAGP 76
           + LA+ L+  PS++P DAG   ++   L A+GF   +L       +   N +A RG  G 
Sbjct: 6   IELAQQLIKRPSLSPDDAGCQALMIERLQAIGFTVEKLDV-----DDTQNFWAWRG-QGK 59

Query: 77  CFGFAGHTDVVPAGDG--WSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGPD 134
              FAGHTDVVP GD   W  PPF   + DG L GRGAADMKG +A  V A  R ++   
Sbjct: 60  TLAFAGHTDVVPTGDNNQWQTPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVA--- 116

Query: 135 STGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLGD 194
                +  +  G +A LIT DEE  A++GT KV+E +    ER++ CLVGEP++ + +GD
Sbjct: 117 -----AHPNHQGRLAFLITSDEEASAVNGTVKVVETLMARQERLEYCLVGEPSSTDRVGD 171

Query: 195 MIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQPSSL 254
           ++K GRRGS+TA + + G  GHVAYPHLADNP+HR       L+A   D G   F P+S+
Sbjct: 172 VVKNGRRGSITANLRIHGVQGHVAYPHLADNPVHRAIPALNELVATVWDQGNEFFPPTSM 231

Query: 255 QLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDESGFSLVLE 314
           Q+ +I+ G  + NVIP +  ++FN RF    S E     I+ +  A  D  +  ++L   
Sbjct: 232 QIANINAGTGSNNVIPGELDVQFNFRF----STELTDELIKQQVEALLDRHQLNYTLEWR 287

Query: 315 HSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFI-RSHCPVAEFGLVGRTM 373
            SG  FLT  G L D +  A +  +   P+L T+GGTSD RFI R    V E G V  T+
Sbjct: 288 LSGHPFLTGRGELVDAVVNAVEHYSEITPQLLTTGGTSDGRFIARMGSQVVELGPVNATI 347

Query: 374 HKPDERVAVADLEALSEIYRRVL 396
           HK +E V+ ADL+ LS +Y+R++
Sbjct: 348 HKVNECVSAADLQLLSRMYQRIM 370