Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 375 a.a., N-succinyl-diaminopimelate deacylase from Escherichia coli BL21

 Score =  269 bits (687), Expect = 1e-76
 Identities = 161/383 (42%), Positives = 218/383 (56%), Gaps = 21/383 (5%)

Query: 17  LALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGAGP 76
           + L + L+  PS++P DAG   +L   L A+GF   R+ F         N +A RG  G 
Sbjct: 6   IELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFAD-----TQNFWAWRG-QGE 59

Query: 77  CFGFAGHTDVVPAGDG--WSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGPD 134
              FAGHTDVVP GD   W  PPF   + DG L GRGAADMKG +A  V A  R ++   
Sbjct: 60  TLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVA--- 116

Query: 135 STGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLGD 194
                   + TG +A LIT DEE  A +GT KV+E +    ER+D CLVGEP++ E +GD
Sbjct: 117 -----QHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGD 171

Query: 195 MIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQPSSL 254
           ++K GRRGSLT  +T+ G  GHVAYPHLADNP+HR +     L+A   D G   F  +S+
Sbjct: 172 VVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSM 231

Query: 255 QLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDESGFSLVLE 314
           Q+ +I  G  + NVIP +  ++FN RF    S E     I+A+ LA  +  +  +++   
Sbjct: 232 QIANIQAGTGSNNVIPGELFVQFNFRF----STELTDEMIKAQVLALLEKHQLRYTVDWW 287

Query: 315 HSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFI-RSHCPVAEFGLVGRTM 373
            SG  FLT  G L D +  A +     +P+L T+GGTSD RFI R    V E G V  T+
Sbjct: 288 LSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATI 347

Query: 374 HKPDERVAVADLEALSEIYRRVL 396
           HK +E V  ADL+ L+ +Y+R++
Sbjct: 348 HKINECVNAADLQLLARMYQRIM 370