Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 398 a.a., succinyl-diaminopimelate desuccinylase from Agrobacterium fabrum C58

 Score =  393 bits (1009), Expect = e-114
 Identities = 211/397 (53%), Positives = 261/397 (65%), Gaps = 20/397 (5%)

Query: 15  DPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGA 74
           DP+A   AL+ CPSVTP + GAL +L++ L  LGF   R+    +G   V+NLYAR G  
Sbjct: 5   DPVANLAALIRCPSVTPAEGGALSLLDTLLSPLGFAVERVMATEDGTPDVENLYARLGTE 64

Query: 75  GPCFGFAGHTDVVPAGD--GWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISG 132
           GP   FAGHTDVVP GD   WS PPF A++  G + GRGA DMKGGIACFVAA+AR    
Sbjct: 65  GPHLMFAGHTDVVPVGDEAAWSHPPFSADIAGGEMYGRGAVDMKGGIACFVAAIAR---- 120

Query: 133 PDSTGSISRHD-PTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEG 191
                 I +H  P GS++ LITGDEEGP+++GT K+LEW    GE  D C+VGEPTNP+ 
Sbjct: 121 -----HIGKHGKPQGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQ 175

Query: 192 LGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQP 251
           LGDMIKIGRRGSL+  +T+ G  GH AYPHLADNP+  L  LT  L+    D GT  FQP
Sbjct: 176 LGDMIKIGRRGSLSGRITVQGVQGHAAYPHLADNPIRGLLQLTHALMHPAFDHGTDDFQP 235

Query: 252 SSLQLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDE----- 306
           S+L++T++D GN A NVIPA+AT  FNIRFND  + ESL A I  R  AA +  E     
Sbjct: 236 SNLEVTTVDTGNAATNVIPARATAAFNIRFNDSWTAESLRAEIIRRLDAAANEGELRPDR 295

Query: 307 --SGFSLV-LEHSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIRSHCPV 363
               + +V  +     FLT    L   ++ A + VTG+ P+LST+GGTSDARFI+ +CPV
Sbjct: 296 APVKYEIVWADRPSHVFLTRNNALISSLSGAIETVTGKEPKLSTTGGTSDARFIKDYCPV 355

Query: 364 AEFGLVGRTMHKPDERVAVADLEALSEIYRRVLVGFF 400
            EFGLVG+TMH  DERVAVADLE L+ IY   +  +F
Sbjct: 356 VEFGLVGQTMHMVDERVAVADLETLTRIYETFIERWF 392