Pairwise Alignments

Query, 659 a.a., DNA-directed DNA polymerase (NCBI) from Rhodospirillum rubrum S1H

Subject, 328 a.a., DNA polymerase III subunit delta' from Pseudomonas putida KT2440

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)

Query: 56  QEALVRTLTNAIDSGRLAQAWMLTGVRGVGKTTTARLIARALNCVGADGKGGVTITPCGV 115
           Q+AL + L       R A A++L G +G+GK   A  +   L C    G     +  CG 
Sbjct: 8   QQALWQQLAGR---SRHAHAYLLHGPQGIGKRAMAERLMARLLCQQPQG-----LDACGA 59

Query: 116 CEHCKAIAEDRHVD--VLEMDAASRT-GVGDIREILDGVRYRPAVARTKVYIIDEVHMLS 172
           C+ C  +    H D  VLE + A +   V  +RE++  V     +   KV +I+ V  ++
Sbjct: 60  CKSCLLLKAGSHPDNFVLEPEEADKPIKVDQVRELVAFVVQTAQLGGRKVVLIEPVEAMN 119

Query: 173 TAAFNALLKTLEEPPEHVKFIFATTEIRKVPVTVLSRCQRFDLRRVSAAE 222
             A NALLK+LEEP      +  T +  ++  T+ SRCQ+    + S A+
Sbjct: 120 VNASNALLKSLEEPSGDTVLLLVTHQPSRLLPTIKSRCQQVACPQPSLAQ 169