Pairwise Alignments

Query, 659 a.a., DNA-directed DNA polymerase (NCBI) from Rhodospirillum rubrum S1H

Subject, 596 a.a., DNA polymerase III subunit gamma/tau from Magnetospirillum magneticum AMB-1

 Score =  625 bits (1613), Expect = 0.0
 Identities = 346/608 (56%), Positives = 412/608 (67%), Gaps = 47/608 (7%)

Query: 32  TPASAPYRVLARKYRPASFDALIGQEALVRTLTNAIDSGRLAQAWMLTGVRGVGKTTTAR 91
           TPA  PYRVLARKYRP  F  LIGQEA+VRTL+NAI +GRLA A++LTGVRGVGKTTTAR
Sbjct: 4   TPAPTPYRVLARKYRPTDFAGLIGQEAMVRTLSNAIKTGRLAHAFVLTGVRGVGKTTTAR 63

Query: 92  LIARALNCVGADGKGGVTITPCGVCEHCKAIAEDRHVDVLEMDAASRTGVGDIREILDGV 151
           +IARALNCVG DGKGG TI PCG CEHC+AIAEDRHVD+LEMDAASRTGV DIREI++GV
Sbjct: 64  IIARALNCVGLDGKGGPTIDPCGQCEHCRAIAEDRHVDILEMDAASRTGVNDIREIIEGV 123

Query: 152 RYRPAVARTKVYIIDEVHMLSTAAFNALLKTLEEPPEHVKFIFATTEIRKVPVTVLSRCQ 211
           RYRP  AR K+YIIDEVHMLSTAAFNALLKTLEEPPEHVKF+FATTEIRK+PVTVLSRCQ
Sbjct: 124 RYRPTSARFKIYIIDEVHMLSTAAFNALLKTLEEPPEHVKFVFATTEIRKIPVTVLSRCQ 183

Query: 212 RFDLRRVSAAELSGHFLRIAGLEGAEIAPSALTLIARAADGSVRDGLSLLDQAIAHGGGT 271
           RFDLRRV    L+ HF  IA  E AEI P+AL LIARAADGSVRDGLSLLDQAI+HG G 
Sbjct: 184 RFDLRRVEMEVLAKHFESIAAKEQAEIEPAALKLIARAADGSVRDGLSLLDQAISHGAGA 243

Query: 272 VSEAQVAEMLGLADRARIFDLLDALLAGRIAESLDLLDRQYALGADPLVIVQDLLDLVHW 331
           V+EAQV +MLGLADRAR+FDLLDA++ G++  +LD +  QYA GADP+V++QD+L+LVHW
Sbjct: 244 VTEAQVRDMLGLADRARVFDLLDAIMKGQVPAALDQITDQYAAGADPVVVLQDMLELVHW 303

Query: 332 MTRVKVVPVSAEDAAVPEAERTRGRAMAERLSMAVLNRCWQILLKGLGEARGAPVPLQAV 391
           +TR+KV P +A+     E ER +G  M++ LS+A L R WQ+LLKGLGE R AP PLQA 
Sbjct: 304 LTRLKVTPDAADQLGASETERVKGAEMSKTLSLAALTRAWQMLLKGLGETRNAPNPLQAA 363

Query: 392 EMVLIRLAYASDLPTPEEALKMIAGGAQPAAPRPPAPHSPAGPPPAAPPPPSPPSRADEP 451
           EM ++RLAYA++LP+P E ++ +   A P  P PPAP  P G                  
Sbjct: 364 EMAVVRLAYAAELPSPAELVEQLR--ANP--PPPPAPRGPGG------------------ 401

Query: 452 PRPSRPSQSNAGGGALAVAPVEVAPDPPPPP-------PPPPAPPAADPAGAFDPVPRSF 504
                      GGGA AV+   +   P   P       P P A     PA     +P  F
Sbjct: 402 ---GGSGGGFGGGGADAVSNHHMGGGPVHGPATALKLQPAPVAETVTLPA-----MPPDF 453

Query: 505 ALLVDLFRRKREAVVTGHLYRDVELVGYDPEAGLLEIHPLPAAPAKLAGQITRLLGEWTG 564
           A +V LF  +RE ++   L   V LV +   AG +E        + LA +  RLL EWTG
Sbjct: 454 AAVVALFTERREGLIAVQLRTQVNLVSF--AAGRIEWRQNSGVGSDLAPKTARLLSEWTG 511

Query: 565 RRWMVTLTDR-PGQPTLHD-------ATQADIHAHPLVKAVLDRFPGAVIGTIREHPGAV 616
           RRW V++      QPTL +         +AD    PLVKAVL  FPGA I  +R+     
Sbjct: 512 RRWTVSVNSTDSAQPTLAEQEANAELRRRADAAELPLVKAVLAAFPGATIEAVRDLGAEE 571

Query: 617 AAEADSPD 624
             +A  P+
Sbjct: 572 LPDAPPPE 579