Pairwise Alignments

Query, 419 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 585 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (510), Expect = 6e-56
 Identities = 115/284 (40%), Positives = 165/284 (58%)

Query: 132 EAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLGDMARSTDDQSVRVADAA 191
           +A D + +    + +   D++  +V ++A   + L  +A +LG  A  T  ++  V+ A 
Sbjct: 299 QARDARQQRVMAATARFEDRVAGLVTAMAEGVSGLHRAADTLGATAEQTRVRAATVSGAT 358

Query: 192 RDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTINTLAQASARIG 251
              S NV  V+AAT + +ASI+++A QVE +S+ A  AV  A +    + TL +A+ RIG
Sbjct: 359 ATTSENVETVSAATSQLTASISEIARQVETSSESARGAVRQAEQTNQRVKTLTEAAGRIG 418

Query: 252 EVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTARATDEIVGQIE 311
           +VVGLI DIASQTNLLALNATIE+ARAGEAGKGFAVVAGEVKTLA QT RAT +I   I 
Sbjct: 419 DVVGLITDIASQTNLLALNATIESARAGEAGKGFAVVAGEVKTLAGQTTRATGDIAAHIA 478

Query: 312 GMRTATHEAVLAIQGIGETIREISEAAQAIHHAISEQRAVVGEIAGNVHRAVDGVRIVAE 371
            ++  T EAV A+ GIG+ I  + +    +  A+++Q     EIA ++ +  D  R V+ 
Sbjct: 479 TVQAETREAVDALAGIGQAITRVEDLVAGVAAAVAQQDVATREIARSIAQTADSARAVSR 538

Query: 372 GIATVAGSVREATGAVEEITGAANDLSCNSEGLSGDVARFITQV 415
            IA V G   E       +  +A  L  +   L   V  F+ +V
Sbjct: 539 TIAEVNGGAEETGALAGAVARSATRLQADGAALDAAVRDFLGEV 582



 Score = 32.3 bits (72), Expect = 4e-05
 Identities = 63/296 (21%), Positives = 107/296 (36%), Gaps = 33/296 (11%)

Query: 127 VNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLGDMARSTDDQSVR 186
           ++  L    R  RG+      +G++       +    A+  A+A+ L  + +  D  S+ 
Sbjct: 112 LDGALAEAGRLWRGYQAKPQALGER--EASERLTPLLAEADAAAAKLRGLLQKKDKISL- 168

Query: 187 VADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTINTLAQA 246
           +  A R+    +  V        +   D+A      S  A +AV       + +  +A A
Sbjct: 169 LGFANRELPKAIDPVTEGLRALISLQLDLAQ-----SDYAESAVRQKTTTLAMLALIALA 223

Query: 247 SARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTARATDEI 306
            A +G V+ L    +    L ALNA +    AGE      V   E +T     A      
Sbjct: 224 VA-VGAVLSLAVLRSITRPLGALNAAVARLSAGETAT--PVPGTEARTEIAPLA------ 274

Query: 307 VGQIEGMRTATHEAVLAIQGIGETIREISEAAQAIHHAISEQRAVVG------EIAGNVH 360
            G IE  RT   E         E+ R  +EA +       +QR +         +AG V 
Sbjct: 275 -GAIEQWRTTLVE---------ESRRRAAEARERQARDARQQRVMAATARFEDRVAGLVT 324

Query: 361 RAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCNSEGLSGDVARFITQVS 416
              +GV  +     T+  +  +       ++GA    S N E +S   ++    +S
Sbjct: 325 AMAEGVSGLHRAADTLGATAEQTRVRAATVSGATATTSENVETVSAATSQLTASIS 380



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 354 EIAGNVHRAVDGVRIVAEGIATVAGSVREA 383
           ++  N HR + G    AEGIA + G++ EA
Sbjct: 90  DVVDNTHRILGGTVSYAEGIARLDGALAEA 119