Pairwise Alignments

Query, 419 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 547 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  213 bits (543), Expect = 9e-60
 Identities = 152/419 (36%), Positives = 220/419 (52%), Gaps = 39/419 (9%)

Query: 7   GGAVASLAVAS-NDWLDLGLAGG---LVLAGGMALILLRSLKAQI-AKASDVAAAARGDL 61
           G     +AV S N  +DL +  G   +V+   +A  + RS+   + A    +   A GD 
Sbjct: 159 GTEQGEVAVKSINRGIDLSILVGAISVVIGMVLAFFISRSITNPVNAMTRAMGVLAGGDT 218

Query: 62  GARIMGIGGTGEIPRMHYNINHLLDVT---EAFARESGAALSFASRGEYYRKILRRGMVG 118
              I   G   EI  M + +    D     +A  +E   A    +R E  RK     M  
Sbjct: 219 SVEIPATGQKDEIGEMAHAVQVFKDNAIRVKAMQKEQEDA---KARAEAERKQAMLNMAD 275

Query: 119 DFGRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLGDMAR 178
            F                      ESA      +M +V  V++ A+++QA++ S+   A+
Sbjct: 276 SF----------------------ESA------VMGLVKGVSAQASEMQATSQSMSAGAQ 307

Query: 179 STDDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAES 238
            T  Q+  VA AA++A+ANV  VAAA EE S+SI++++ QV   +QV+  A     +  +
Sbjct: 308 QTSAQAATVAAAAQEATANVQTVAAAAEELSSSISEISRQVAEAAQVSATASEETARTNA 367

Query: 239 TINTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQ 298
            +  LA A+ +IGEVV LINDIA+QTNLLALNATIEAARAG+AGKGFAVVA EVK LA Q
Sbjct: 368 MVQGLAHAADKIGEVVSLINDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKNLANQ 427

Query: 299 TARATDEIVGQIEGMRTATHEAVLAIQGIGETIREISEAAQAIHHAISEQRAVVGEIAGN 358
           TARAT+EI  Q+  ++  T  AV AI+ I   I ++ + +  I  A+ EQ A   EIA N
Sbjct: 428 TARATEEISSQVGSVQEETRRAVDAIRNIATVIEQVQQISSGIASAVEEQGAATAEIARN 487

Query: 359 VHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCNSEGLSGDVARFITQVSA 417
           V  A  G + V+  +  +  +  E   A +++  A+ +L+ NSE L  +V +F+  V A
Sbjct: 488 VQEAAKGTQDVSANVQGITQTASETGAASQQVLAASGELARNSETLRAEVDKFLDGVRA 546