Pairwise Alignments

Query, 419 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 576 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  223 bits (569), Expect = 9e-63
 Identities = 128/273 (46%), Positives = 179/273 (65%)

Query: 145 ASEMGDKIMHVVHSVASAAAQLQASASSLGDMARSTDDQSVRVADAARDASANVSGVAAA 204
           A+E+   +   V +V+ +A +++++A+ +     +   +S  VA AA+  S+NV  VAAA
Sbjct: 303 ATELERGVKSTVVTVSESAGRMRSTATGMAGAIDNASQESQAVAAAAQQTSSNVEAVAAA 362

Query: 205 TEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTINTLAQASARIGEVVGLINDIASQT 264
            EE S+SI  +  QV  ++Q+A  AV  A + +  +  L++A+ RIGEVV LINDIA QT
Sbjct: 363 AEELSSSIRGIGSQVAESTQIAKEAVDAANRTDGVVRGLSEAADRIGEVVRLINDIAGQT 422

Query: 265 NLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTARATDEIVGQIEGMRTATHEAVLAI 324
           NLLALNATIEAARAGEAGKGFAVVA EVK LA QTA+AT+EI  QI  +++ T +AV AI
Sbjct: 423 NLLALNATIEAARAGEAGKGFAVVANEVKHLASQTAKATEEIGQQIASIQSTTADAVGAI 482

Query: 325 QGIGETIREISEAAQAIHHAISEQRAVVGEIAGNVHRAVDGVRIVAEGIATVAGSVREAT 384
           + IG+TI  + E A AI  A+ +Q A   EIA NVH A DG + V+  I++++ +  EA 
Sbjct: 483 ESIGKTIGRMDEIANAIAEAVEQQGAATQEIARNVHEAADGAQEVSHHISSISRTASEAG 542

Query: 385 GAVEEITGAANDLSCNSEGLSGDVARFITQVSA 417
            A  E+ GAA +L+  SE L   V RF+ +V A
Sbjct: 543 VAARELLGAAAELAGESETLRNGVDRFLGEVRA 575



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 30/188 (15%)

Query: 218 QVERTSQVAHNAVVTAGKAESTINTLAQASARIGE----VVGLINDIASQTNLLALNATI 273
           + ER S +A  A       +ST+ T+++++ R+      + G I++ + ++  +A  A  
Sbjct: 292 EAERRSTLAGLATELERGVKSTVVTVSESAGRMRSTATGMAGAIDNASQESQAVAAAAQQ 351

Query: 274 EAARAGEAGKGFAVVAGEVKTLAQQTARATDEIVGQIEGMRTATHEAVLAIQGIGETIRE 333
            ++           ++  ++ +  Q A +T               EAV A       +R 
Sbjct: 352 TSSNVEAVAAAAEELSSSIRGIGSQVAESTQ-----------IAKEAVDAANRTDGVVRG 400

Query: 334 ISEAAQAIHHAISEQRAVVGEIAGN-----VHRAVDGVRI--VAEGIATVAGSVR----E 382
           +SEAA  I   +     ++ +IAG      ++  ++  R     +G A VA  V+    +
Sbjct: 401 LSEAADRIGEVV----RLINDIAGQTNLLALNATIEAARAGEAGKGFAVVANEVKHLASQ 456

Query: 383 ATGAVEEI 390
              A EEI
Sbjct: 457 TAKATEEI 464