Pairwise Alignments

Query, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score = 70.5 bits (171), Expect = 4e-17
 Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 37/276 (13%)

Query: 12  VGRAFPVLVVGAVLLCLWYAAALLLNQGLVDQAMVRSGQQWSIGQRLEAAATHQRPILPT 71
           +G  F  L+    LL LW AAA +   GLVD          SI     A           
Sbjct: 8   LGERFIGLLTPLALLGLWEAAARM---GLVDARFFPPPS--SIVHTFGALVA-------- 54

Query: 72  PVQVGAELWKSVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFRVLEA 131
                 ELW +++     S R L L         L+G V    LGL + +     + L A
Sbjct: 55  ----SGELWTNLL----ASLRRLFL-------GMLLGGVPALFLGLAMGIS----KPLRA 95

Query: 132 SLLPWVIASQTIPILAIAPMVVVVLGAIGLTGLVPKAIISMYLCFFPVTVGMVKGLRSAD 191
           ++ P + A+  IP  AI P+V+++ G     G + K ++     F+P+ +  V G+ + D
Sbjct: 96  AIDPLISATYPIPKSAILPLVLLIFGL----GEMSKVVMVALGAFYPILINTVMGVANID 151

Query: 192 ALSMDLMRTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGELPTGAAMGLGA 251
            + +D+   Y A   QVF  + LP ALP + A +K+A+   L+   + E+   A+ G+G 
Sbjct: 152 KIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKLAMGMGLILIAISEM-VAASDGIGY 210

Query: 252 RLLAGSYYGQTVQMWAALVMAAALSLFLVFLVGRAE 287
            +           M+  L++ A L      ++   E
Sbjct: 211 MIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIE 246