Pairwise Alignments

Query, 338 a.a., Uncharacterized P-loop ATPase protein UPF0042 (NCBI) from Rhodospirillum rubrum S1H

Subject, 285 a.a., RNase adapter protein RapZ from Pseudomonas sp. S08-1

 Score =  201 bits (512), Expect = 1e-56
 Identities = 116/285 (40%), Positives = 166/285 (58%), Gaps = 8/285 (2%)

Query: 55  RVIVVTGMSGAGRTTVLRALEDIGYEAVDNLPLSLF-----EALTQGRWDQPRPLVLGID 109
           R+I+V+G SG+G++T L  LED G+  +DNLP  L       AL Q     P+ + + +D
Sbjct: 2   RLIIVSGRSGSGKSTALDVLEDNGFYCIDNLPAGLLPDLAERALLQTELLHPQ-VAVSVD 60

Query: 110 TRTRGFHAATVLAAIERLVAATGFDVRLLFIDCDDEVLVRRYTETRRRHPLA-VDRPLAD 168
            R            ++  V +      +L++D D++ L++R++ETRRRHPL   DR LA+
Sbjct: 61  ARNLPSQLKRFPELLDE-VRSRHIQCDVLYLDADEDTLLKRFSETRRRHPLTNEDRALAE 119

Query: 169 GIALERALVAPLKERASRCLDTSILPPAKLRAVIEAEFSLDHRPELAIFVSSFGFRNGLP 228
            I  E  L+AP+ + A   +DT+ L   +LR  ++        P  A  V SFGF+ G+P
Sbjct: 120 AIRDEAQLLAPIIDLADLKIDTTHLNLYQLRDTLKLRLLNKPEPGTAFLVESFGFKRGMP 179

Query: 229 READLVFDVRFLANPHYEPHLREMTGLDPAVAAYVAADPDFAPLIDRVTALLALLVPRYE 288
            +ADLVFDVR L NP+++P LR+M+GL+  VA Y+AA PD   +   + A L   +PR+ 
Sbjct: 180 VDADLVFDVRCLPNPYWKPDLRDMSGLEAPVAEYLAAQPDVEEMYQDIQAYLHKWLPRFA 239

Query: 289 KEGKSYLTIAIGCTGGKHRSVYTAERLAAWLNETGRRAHVRHRDL 333
              +SY+TIAIGCTGG HRSVY A RL   L    +   VRHRDL
Sbjct: 240 ASNRSYVTIAIGCTGGHHRSVYLANRLGEALKPVLKNVQVRHRDL 284