Pairwise Alignments

Query, 338 a.a., Uncharacterized P-loop ATPase protein UPF0042 (NCBI) from Rhodospirillum rubrum S1H

Subject, 284 a.a., RNase adapter RapZ from Serratia liquefaciens MT49

 Score =  201 bits (511), Expect = 2e-56
 Identities = 112/281 (39%), Positives = 161/281 (57%), Gaps = 3/281 (1%)

Query: 56  VIVVTGMSGAGRTTVLRALEDIGYEAVDNLPLSLFEALTQGRWDQPRPLVLGIDTRTRGF 115
           +++V+G SG+G++  LRALED+G+  VDNLP+ L   L     ++     + ID R    
Sbjct: 3   LMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNMPE 62

Query: 116 HAATVLAAIERLVAATGFDVRLLFIDCDDEVLVRRYTETRRRHPLAVDR-PLADGIALER 174
                  A+ +L     F  +LLF+D D   L+RRY++TRR HPL+     L   I  E 
Sbjct: 63  SPEVFEYAMTQL--PDSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES 120

Query: 175 ALVAPLKERASRCLDTSILPPAKLRAVIEAEFSLDHRPELAIFVSSFGFRNGLPREADLV 234
            L+ PL+ RA   +DTS +   +L  ++          EL +   SFGF++G+P +AD V
Sbjct: 121 DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV 180

Query: 235 FDVRFLANPHYEPHLREMTGLDPAVAAYVAADPDFAPLIDRVTALLALLVPRYEKEGKSY 294
           FDVRFL NPH++P LR MTGLD  VA+++    +    I +  + L   +P  E   +SY
Sbjct: 181 FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY 240

Query: 295 LTIAIGCTGGKHRSVYTAERLAAWLNETGRRAHVRHRDLKE 335
           LT+AIGCTGGKHRSVY AE+LA +    G+    RHR L++
Sbjct: 241 LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEK 281