Pairwise Alignments

Query, 241 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

Subject, 242 a.a., two-component system DNA-binding transcriptional dual response regulator PhoB from Pseudomonas putida KT2440

 Score =  139 bits (351), Expect = 4e-38
 Identities = 83/231 (35%), Positives = 131/231 (56%), Gaps = 13/231 (5%)

Query: 4   SIALVDDDRNILTSVSMTLEAEGFRVVTYTDGAEALRGLSIEPVDLAVLDIKMPRMDGME 63
           +I +VDD+  I   +++ LE  G+  +   +  +A   +     DL +LD  +P   G+E
Sbjct: 18  NILIVDDEAPIREMIAVALEMAGYDCLEAENSQQAHAIIVDRKPDLILLDWMLPGTSGIE 77

Query: 64  LLQKLR--ERTA-MPVIFLTSKDDEVDELLGLRMGADDYIKKPFSQRLLIERIRAILRRL 120
           L ++L+  E T  +P+I LT+K +E +++ GL +GADDYI KPFS R L+ R++A+LRR 
Sbjct: 78  LARRLKRDELTGDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRRT 137

Query: 121 DLQKASPGGPELSAAALVRGDLTLDPDRHLCTWLERPVDLTVTEFLIIQALAQRPGHVKS 180
                   GP  S A +  G L LDP  H  T   +P ++  TE+ ++Q          +
Sbjct: 138 --------GPSDSEAPIEVGGLLLDPISHRVTIDGKPAEMGPTEYRLLQFFMTHQERAYT 189

Query: 181 RDQLIDAAYGENIYVDDRTIDSHIKRLRKKFREVDREFSEIETLYGVGYRY 231
           R QL+D  +G N+YV++RT+D HI+RLRK   E       ++T+ G GYR+
Sbjct: 190 RGQLLDQVWGGNVYVEERTVDVHIRRLRKALGEAYENL--VQTVRGTGYRF 238