Pairwise Alignments

Query, 290 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  116 bits (291), Expect = 5e-31
 Identities = 94/293 (32%), Positives = 145/293 (49%), Gaps = 27/293 (9%)

Query: 7   LNLAFNGAVIGLITALAALSITLVFGIARFPNAATGDV-ATAGAFAGLLGPVLGSGALPI 65
           + L      IG +  L +L +TL+FG+ R  N A G + A +      + P L +   P+
Sbjct: 5   VQLTLTSLQIGAVYILFSLGLTLIFGVMRIVNFAHGHLFAVSALVVAAIVPWLSASGFPV 64

Query: 66  I-------LVGMATSAAVSLLFYVVLFRALAKRSPVASLIASIGMAFFLRAVLTYFIGHD 118
           +       + G+  S A+    YV  FR   +R  V S I SIG+   L  +L    G  
Sbjct: 65  LAAYLVGAVAGILASLALGFAMYVGGFRFF-QRDLVGSFILSIGLVLLLDGILMKIFGGA 123

Query: 119 QRVYPLPLVRAVPFGPLRVQAADI--QVIVWAGAALAVTFAL---IHLTPIGKRMRAVAD 173
            R    P+   +P G L V  A I  Q +    AA+AVT  L   +  T +GK +RAV+ 
Sbjct: 124 VR----PMPDIIP-GTLSVLGAAITSQRLALCVAAVAVTALLYWALTRTKLGKALRAVSI 178

Query: 174 NPDLARSSGINANKVMVVMWVVAGLLAGLAGTLLGVKTVVSPEMGWDLLMPAFAATILGT 233
           + + A   GI  N++ +  +++A  LA LAG L+   T+VSP +G D L+  F A I+G 
Sbjct: 179 DHEAAMLQGIPYNRMALSGFMIAAGLAALAGALIAPVTIVSPVIGADYLIKGFIAVIVGG 238

Query: 234 IGNPLGAVLGGLLIGLAQELSTPLVGFTYKIGVG----FLVLLLTLLIRPQGL 282
           +G+  GA+LGGL +   + L     GF +         F++++  LL+RP+GL
Sbjct: 239 LGSVPGAILGGLFVAAIETLG----GFYFDPSSATIAIFILVIAVLLVRPKGL 287