Pairwise Alignments

Query, 290 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  111 bits (278), Expect = 2e-29
 Identities = 81/299 (27%), Positives = 149/299 (49%), Gaps = 15/299 (5%)

Query: 1   MDSAYLLNLAFNGAVIGLITALAALSITLVFGIARFPNAATGDVATAGAFAGLLGPVL-- 58
           MD  +L  L  NG  +G +  L A+  T+V+GI    N A G+V    A+   +   L  
Sbjct: 1   MDGIFLQQLV-NGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLA 59

Query: 59  --GSGALPIILVG-----MATSAAVSLLFYVVLFRALAKRSPVASLIASIGMAFFLRAVL 111
             G  + P++++G     +  +         + ++ L   + +A LI++IG++  L+   
Sbjct: 60  YFGVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYA 119

Query: 112 TYFIGHDQRVYPLPLVRA----VPFGPLRVQAADIQVIVWAGAALAVTFALIHLTPIGKR 167
               G  Q+  P  L  A    V  G +++    I ++V A   + +   +I  T +G+ 
Sbjct: 120 QISQGARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRM 179

Query: 168 MRAVADNPDLARSSGINANKVMVVMWVVAGLLAGLAGTLLGVKT-VVSPEMGWDLLMPAF 226
            RA   +  +A   GIN ++V+  ++V+  ++A LAG L+ +         G+ + + AF
Sbjct: 180 CRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAF 239

Query: 227 AATILGTIGNPLGAVLGGLLIGLAQELSTPLVGFTYKIGVGFLVLLLTLLIRPQGLFAK 285
            A +LG IG+  GA+LGG+++G+++ L + L+   YK    F +L++ L+ RPQGL  +
Sbjct: 240 TAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGR 298