Pairwise Alignments

Query, 290 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 7e-28
 Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 12/294 (4%)

Query: 5   YLLNLAFNGAVIGLITALAALSITLVFGIARFPNAATGDVATAGAFAGLLGPVLGSGALP 64
           + L     G + G + +L A+   L++  +   N A G +     FA L    L    LP
Sbjct: 3   FFLETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLL---FAALTFVSLHEQGLP 59

Query: 65  IILVGMATSAAV---SLLFYVVLFRALAKRSPVASLIASIGMAFFLRAVLTYFIGHDQRV 121
             L    T   +   +LL   ++ R L  RS +   +A++G++F +  +    +G   R 
Sbjct: 60  FALALALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVRA 119

Query: 122 YPLPLVRAVPF-GPLRVQAADIQVIVWAGAALAVTFALIHLTPIGKRMRAVADNPDLARS 180
             L +     F G L +   D+     +   +AV   L + T IG  +RAVAD+   A S
Sbjct: 120 LDLGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALS 179

Query: 181 SGINANKVMVVMWVVAGLLAGLAGTLLGVKTVVSPEMGWDLLMPAFAATILGTIGNPLGA 240
            GIN N++  ++W VAG++  +AG L G +  V   +   +++ A    I+G   +  GA
Sbjct: 180 LGINLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLSL-VVLKALPVLIIGGFTSIGGA 238

Query: 241 VLGGLLIGLAQELST----PLVGFTYKIGVGFLVLLLTLLIRPQGLFAKNSLVR 290
           ++GGL++G A+ L+     PL+G        + + L+ L IRP GLF   ++ R
Sbjct: 239 IVGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGDRAIER 292