Pairwise Alignments

Query, 233 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 236 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  171 bits (434), Expect = 9e-48
 Identities = 93/235 (39%), Positives = 144/235 (61%), Gaps = 4/235 (1%)

Query: 1   MSVLVVEGMAAGYGDVDILSDIALRVDPLEIVTIAGTNGAGKSTLVKGLMGLLTRIRGKV 60
           M++L VEG+ +GYG + +LS++++ V   E V I G NGAGKSTL++ + GL+T   G +
Sbjct: 1   MTLLSVEGIRSGYGSLQVLSEVSIEVAEGEAVAILGPNGAGKSTLLRTISGLITPTAGAI 60

Query: 61  EFEGTSLLGVAAERRIHLGISYVPQVNNVFPSLTVLENLEV----VEGVGNRARQIAKMI 116
            F+G  LL + A R  H G+  VP+  ++FPSL+V ENL V    +   G R   +  + 
Sbjct: 61  SFDGHDLLAMPAHRIPHAGLVQVPEARHIFPSLSVRENLLVGGTPLPTRGAREAALDDIW 120

Query: 117 ERFPALAARRATRAGALSGGERQQLAFARALMPAPRLVILDEPTAALSPALVTGVLETIR 176
             FP L  +R   AG LSGG++Q +A  RALM  PRLV+LDEP+  L+P +V  + E +R
Sbjct: 121 RIFPMLVTKRDAPAGTLSGGQQQMVAIGRALMSRPRLVMLDEPSLGLAPLVVRELYEVLR 180

Query: 177 GLPGLGVSVLLVEQRARQALAISDQGCILDSGKVVIADRASALLADERMAELYLG 231
            L   G+++LLVEQ    AL++  +  ++++G + ++  AS L   + + + YLG
Sbjct: 181 SLVQSGLTLLLVEQDVPVALSLVSRAYVVENGSIALSGTASELRESDHVRQAYLG 235