Pairwise Alignments

Query, 233 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 240 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  155 bits (393), Expect = 5e-43
 Identities = 91/237 (38%), Positives = 138/237 (58%), Gaps = 8/237 (3%)

Query: 3   VLVVEGMAAGYGDVDILSDIALRVDPLEIVTIAGTNGAGKSTLVKGLMGLLTRIRGKVEF 62
           +L V  + AGYG V +L  ++L+V+  ++VT+ G+NGAGK+T ++ + G++    G V  
Sbjct: 1   MLEVNDLVAGYGKVKVLHGLSLKVEEGQLVTLIGSNGAGKTTTLRAISGMIPPESGSVHL 60

Query: 63  EGTSLLGVAAERRIHLGISYVPQVNNVFPSLTVLENLEV--------VEGVGNRARQIAK 114
            G  L G+ + +    G+++ P+   VFP+ +V +NL +            G+    + +
Sbjct: 61  GGEDLTGLPSFKITKKGLAHSPEGRRVFPTQSVKDNLLLGAFPRLTGARERGDVEGDLDR 120

Query: 115 MIERFPALAARRATRAGALSGGERQQLAFARALMPAPRLVILDEPTAALSPALVTGVLET 174
           M   FP LA RRA  AG LSGGE+Q LA ARALM  PR+++LDEP+  L+P LV  V  T
Sbjct: 121 MFTLFPRLAERRAQLAGTLSGGEQQMLAMARALMLNPRVLLLDEPSMGLAPRLVAEVFAT 180

Query: 175 IRGLPGLGVSVLLVEQRARQALAISDQGCILDSGKVVIADRASALLADERMAELYLG 231
           I  L    +++LLVEQ A  AL ++D G +L++G+V     A AL  D  +   YLG
Sbjct: 181 IARLKEQKITMLLVEQFAAAALEVADFGYVLENGRVAAKGPAEALRNDAAVRAAYLG 237