Pairwise Alignments

Query, 233 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 238 a.a., high-affinity branched-chain amino acid transporter, ATP-binding from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 4e-41
 Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 3/234 (1%)

Query: 3   VLVVEGMAAGYGDVDILSDIALRVDPLEIVTIAGTNGAGKSTLVKGLMGLLTRIRGKVEF 62
           +L ++ +   YG +  L  +++ ++  E V++ G NGAGKSTL+  + G      G + +
Sbjct: 5   ILELKDLDVFYGPIQALKKVSMHINEGETVSLIGANGAGKSTLLMSIFGQPRAASGHIVY 64

Query: 63  EGTSLLGVAAERRIHLGISYVPQVNNVFPSLTVLENL---EVVEGVGNRARQIAKMIERF 119
            GT +   ++      GI+  P+   VFP +TV ENL    +  G  +    + +M E F
Sbjct: 65  RGTDITRKSSHYIASNGIAQSPEGRRVFPDMTVEENLMMGTIPIGDKHADEDMQRMYELF 124

Query: 120 PALAARRATRAGALSGGERQQLAFARALMPAPRLVILDEPTAALSPALVTGVLETIRGLP 179
           P L  RR  RA  +SGGE+Q LA ARALM  P+L++LDEP+  L+P +V  +  T+R L 
Sbjct: 125 PRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIFSTLRELA 184

Query: 180 GLGVSVLLVEQRARQALAISDQGCILDSGKVVIADRASALLADERMAELYLGEH 233
             G+++ LVEQ A  AL +SD+  ++ +G++ +      LL +E +   YLG H
Sbjct: 185 KTGMTIFLVEQNANHALKLSDRAYVMVNGQIRMTGTGQELLVNEEVRNAYLGGH 238