Pairwise Alignments

Query, 233 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 233 a.a., high-affinity branched-chain amino acid transporter, ATP binding from Pseudomonas putida KT2440

 Score =  159 bits (402), Expect = 4e-44
 Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 3/232 (1%)

Query: 3   VLVVEGMAAGYGDVDILSDIALRVDPLEIVTIAGTNGAGKSTLVKGLMGLLTRIRGKVEF 62
           +L  E ++  YG +  L  + + ++  EIVT+ G NGAGKSTL+  L G      G +++
Sbjct: 1   MLKFENVSTFYGKIQALHSVNVEINQGEIVTLIGANGAGKSTLLMTLCGSPQAHSGSIKY 60

Query: 63  EGTSLLGVAAERRIHLGISYVPQVNNVFPSLTVLENLEV---VEGVGNRARQIAKMIERF 119
            G  L+G  +   +   I+ VP+   VF  LTV ENL +       G+   Q+ K+++ F
Sbjct: 61  LGEELVGQPSSHIMRKSIAVVPEGRRVFARLTVEENLAMGGFFTDKGDYQEQLDKVLQLF 120

Query: 120 PALAARRATRAGALSGGERQQLAFARALMPAPRLVILDEPTAALSPALVTGVLETIRGLP 179
           P L  R   R G +SGGE+Q LA  RALM  P+L++LDEP+  L+P ++  + + I  L 
Sbjct: 121 PRLKERYIQRGGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIIIQQIFDIIEQLR 180

Query: 180 GLGVSVLLVEQRARQALAISDQGCILDSGKVVIADRASALLADERMAELYLG 231
             GV+V LVEQ A QAL I+D+  +L++G+VV+     ALL D ++ + YLG
Sbjct: 181 RDGVTVFLVEQNANQALKIADRAYVLENGRVVMQGTGEALLTDPKVRDAYLG 232