Pairwise Alignments

Query, 308 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 305 a.a., Nucleoside-diphosphate-sugar epimerases from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  114 bits (286), Expect = 2e-30
 Identities = 101/293 (34%), Positives = 131/293 (44%), Gaps = 14/293 (4%)

Query: 5   RGHLLCFGLGYSALRLARGLLRDGWRVS--GTCRSEEKRQALSAQGITAFVFDETTPLPA 62
           R  +L  G G    R AR L   G RV       S E+   L AQGIT    +   P   
Sbjct: 13  RERVLIVGCGDVGQRAARAL-GGGARVRLLALTSSAERSPGLRAQGITPLQGNLDDPRSL 71

Query: 63  EAWTGV-THVLVSIPPGPDG------DP-VLALHRADLLALRPEWLGYFSTTGVYGDTGG 114
               G+ T VL   PP  D       DP   AL RA      P  L Y STTGVYGD  G
Sbjct: 72  RRLAGLATRVLHLAPPPSDELADWRLDPRTRALTRALAQRSLPASLVYGSTTGVYGDGQG 131

Query: 115 AWVDEGKPVRPTQERSKRRVAAEEDWLDLWRDEDLPVHLLRLAGIYGP---GRSVFDQLR 171
            W+DE  P  P   R+ RRV AE     L R   +   +LR+ GIY P   G +  ++L 
Sbjct: 132 RWMDEASPANPKTPRAWRRVDAEAAVHWLGRATGVRTSVLRIPGIYAPDRAGGTPRERLL 191

Query: 172 AGTAKRIIRPGHAFSRIHVDDIGLITRASMADPDPGAIYNLVDDEPAEPSEVMDHACALL 231
            GT           + IH DD+      ++    P    N+VDD   +  +  D A  L 
Sbjct: 192 RGTPVLRAEDDVYTNHIHADDLARACVLALWRGRPQRNLNVVDDTELKMGDYFDLAADLY 251

Query: 232 GIDPPPAQSFDEVAPGLSPMALSFWADNRKVSNERLWDDLRLRLLYPTFRQGL 284
           G+  PP  + +     L  + LSF +++R++ N+RL  +L LRL YPT  QGL
Sbjct: 252 GLPRPPRVAREGAGDQLPLVLLSFMSESRRLRNQRLKGELGLRLRYPTVAQGL 304