Pairwise Alignments

Query, 284 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

Subject, 300 a.a., putative permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas putida KT2440

 Score =  216 bits (549), Expect = 6e-61
 Identities = 113/260 (43%), Positives = 160/260 (61%)

Query: 6   VSLVWRFGLASLIMVAWALARGQSLRFSLRDHAWLALQGISLFCANYLLIYTATGLLRSG 65
           VS+V+RF LA LI+ A+ L   +    + R H     QG+ LFC N++   +A+  + SG
Sbjct: 31  VSIVYRFALAGLILFAFLLITRRLQPMNRRGHQICLAQGLCLFCVNFICFLSASQWIASG 90

Query: 66  LVAVACSTIVAMNIVLGAAFFGQPIRPRVAAGAGLGLVGITLVFSPEFSHLSLGDEALRG 125
           L+AV  ST    N +    FFGQ I   V  G  LGL+G+ L+F PE SH +   E L G
Sbjct: 91  LIAVVFSTATLWNALNARIFFGQRIAGNVLGGGALGLLGLGLLFWPELSHHAASRETLYG 150

Query: 126 FVFCLIGTAFASLGNLLAGRNQRTGIGVLAGSGLGMGYGALAMALFAALSGKAFLIDLSL 185
               L+GT   S GN+L+   Q+ G+  +  +  GM YGA+ +A+F  +SG  F ++ + 
Sbjct: 151 LGLALLGTLCFSAGNMLSSMQQKAGLKPMTTNAWGMVYGAVMLAVFCVVSGVPFSMEWNA 210

Query: 186 PYLGSLLYLAVFGSVIAFGCYLTLLGRIGADRASYCAVVYPVVALGLSTAFEGYRWSAAG 245
            Y+GSLLYL V GSVIAF  YLTL+GR+G +RA+YC V++P+VAL +S   EGY+W+A  
Sbjct: 211 RYIGSLLYLVVPGSVIAFTAYLTLVGRMGPERAAYCTVLFPLVALNVSAVAEGYQWTAPA 270

Query: 246 AAGLALVLAGNLLILRRPGA 265
             GL  V+AGN+L+ R+P A
Sbjct: 271 LLGLVAVMAGNVLVFRKPRA 290