Pairwise Alignments

Query, 515 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 755 a.a., putative Phytochrome family protein from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 3e-31
 Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 9/267 (3%)

Query: 226 YREPGDPTV-RGLI---GVVSDITRRQRAEDALRASVVELTASNRELQHFAEIAAHDLQE 281
           Y +  DP V  G+I     V  I  R+  E A  A   EL  SN+EL+ F+   +HDL+ 
Sbjct: 489 YSQAWDPLVIEGVIELRAAVLGIVLRKAEELAQLAG--ELRRSNKELEAFSYSVSHDLRA 546

Query: 282 PVRAVVSHCQLLERHLGDALDGPARDHMIFAITGARRMRDLIQDLLIYARAGRDGQFHEV 341
           P+R +  + +LL    G  L    +  +      A     L+ +LL +++ GR       
Sbjct: 547 PLRHIAGYTELLGEIEGQGLSERGKRFLQHIGEAAHFAGSLVDNLLNFSQMGRSALRLSD 606

Query: 342 VDTADLAREVVSALADEIAASGATIRIDPLPSVLGRRRDLFDVMVNLFDNALKFRRPDVV 401
           VD   L   + S LA +         I PLP V+G    +   + NL  NA+K+ R    
Sbjct: 607 VDLNALVEAIRSELAPDYEGRAIVWDIAPLPKVIGDPAFINMALHNLIANAIKYTRGRTP 666

Query: 402 PEVTLKAAETLDASGLWCFTLSDNGIGLDPVHGAQIFALFRRLHGADRYPGTGVGLAICR 461
             + + A +  + + +    + DNG+G D  +  ++F +F+RLH  + + GTG+GLA  R
Sbjct: 667 ARIEISAVQHPEETEV---CIRDNGVGFDMAYANKLFGVFQRLHRMEDFEGTGIGLASVR 723

Query: 462 RIVEQHGGTIFVESAPGVGTRFHFTLP 488
           RI+E+H G ++       G  FHFTLP
Sbjct: 724 RIIERHDGRVWATGQVDQGASFHFTLP 750



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 36 ASDRVFEILGYPARALIGHPFAELAASG 63
          AS+ V   LG PAR LIG  FA+L   G
Sbjct: 51 ASENVEHWLGLPARELIGCHFADLVHEG 78