Pairwise Alignments

Query, 515 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 535 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  111 bits (278), Expect = 6e-29
 Identities = 111/446 (24%), Positives = 196/446 (43%), Gaps = 57/446 (12%)

Query: 93  LISAVPLFDAQSGDRQGW-----RGAAKDITQSERADAEMDRQRRFQQTLLDAIPLPVFL 147
           L+SAV L    +   + W     R   +      R D  + ++R     L++ IP  VF+
Sbjct: 94  LVSAVNLGQIHAYLSKPWNPLELRVVVRTAADRWRLDRTLQQERTLMLALMNNIPDAVFI 153

Query: 148 KDREDRYQGCNLAFETASGRSR-AEILGQRMEQVLRSENYDRHRAEEALVLREGRTRVWE 206
           KD + ++   N      +G +  ++++GQR+ ++L S++     AEE  +L +G  ++ +
Sbjct: 154 KDLQLKFSRVNQPQARLTGLADPSDLVGQRLSELLESDHARTVEAEERAILDQGVGQL-D 212

Query: 207 AMEH--DVSGRHKLISITASPYREPGDPTVRGLIGVVSDITRRQRAEDALRASVVELT-- 262
            +E   D  G     S+T  P R+ GD  V GL G+  D+T R++AED LR +  EL   
Sbjct: 213 RLESVTDQDGNALWYSVTKVPIRQ-GDEVV-GLAGIARDVTARKQAEDYLRRAHDELQQA 270

Query: 263 ------------------------------ASNRELQHFAEIAAHDLQEPVRAVVSHCQL 292
                                         A++R    F    +H+L+ P+ A++   +L
Sbjct: 271 VEERTRWLQKEISRRAQAEEQAQAAREAAEAASRAKTIFLANMSHELRTPLNAIIGFSEL 330

Query: 293 LERHLGDALDGPARDHMIFAITGARRMRDLIQDLLIYARA--GRDGQFHEVVDTADLARE 350
               +G A        +      A  +  +I D+L  +R   G+      VVD A+  R 
Sbjct: 331 ANSIMGKADMDRYGGFLDNISESAHHLLRVISDILDVSRVEVGKVILRESVVDVAEAVRA 390

Query: 351 VVSALADEIAASGATIRIDP---LPSVLGRRRDLFDVMVNLFDNALKFRRPDVVPEV-TL 406
            +  ++  ++    ++   P   LP +    R +  +++NL  NA KF      PE   +
Sbjct: 391 AMRLVSHVVSNKRQSLTFSPQDGLPLIRADERLMKQIVLNLLSNAAKF-----TPESGNI 445

Query: 407 KAAETLDASGLWCFTLSDNGIGLDPVHGAQIFALFRRLHGA--DRYPGTGVGLAICRRIV 464
           + A  L   G     + D+G+G+     A +   F +   A   ++ GTG+GL + +  +
Sbjct: 446 RVAANL-VDGCVTVEVEDDGVGIAAEDIAMVLQPFGQAENAISPKHEGTGLGLPLAKGFM 504

Query: 465 EQHGGTIFVESAPGVGTRFHFTLPAA 490
           E HGG++ +ES  G GT+   T PA+
Sbjct: 505 ELHGGSLTLESRVGEGTKVMLTFPAS 530