Pairwise Alignments

Query, 515 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 593 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  185 bits (470), Expect = 3e-51
 Identities = 127/411 (30%), Positives = 210/411 (51%), Gaps = 23/411 (5%)

Query: 83  RHSDGSPRVLLISAVPLFDAQSGDRQGWRGAAKDITQSERADAEMDRQRRFQQTLLDAIP 142
           +  DGS   + IS  PL   ++ D      A ++IT  ++A+ +        + LL++ P
Sbjct: 200 KRKDGSVFPVEISLSPL---KTEDGLFVSAAIRNITDRKKAENKF-------KGLLESAP 249

Query: 143 LPVFLKDREDRYQGCNLAFETASGRSRAEILGQRMEQVLRSENYDRHRAEEALVLREGRT 202
             + L D++   Q  N       G S++E++G ++E ++    + RH            T
Sbjct: 250 DAIILADKDGNIQLANEQVVNIFGYSKSELIGNKIEMLVPMRYHHRHTNHRDEFFHTAET 309

Query: 203 RVWEAMEHDVSGRHKL-----ISITASPYREPGDPTVRGLIGVVSDITRRQRAEDALRAS 257
           R   A   ++SG  K      + I+ SP  E  D  +   I V+ D + +   +  ++  
Sbjct: 310 RPM-ASGLELSGVRKSGEEFPVEISLSPL-ETEDGALA--IAVIRDTSEKAAVKKEMQDF 365

Query: 258 VVELTASNRELQHFAEIAAHDLQEPVRAVVSHCQLLERHLGDALDGPARDHMIFAITGAR 317
             +L   N+EL+ FA +A+HDLQEP++ V+S  + L  + G+  D   +  M + +    
Sbjct: 366 NKKLQVKNKELEQFAYVASHDLQEPLQTVMSFTEFLSENYGEHFDETGKKSMQYIMEATG 425

Query: 318 RMRDLIQDLLIYARAGRDGQFHEVVDTADLAREVVSALADEIAASGATIRIDPLPSVLGR 377
           RMR LI+ LL Y+R GR+ +   +VD   L  ++   L+ +I A+ A+I  D LP + G 
Sbjct: 426 RMRQLIKGLLDYSRIGRERK-PVMVDCNSLISDIKVDLSSQIKATNASIHADNLPHIKGN 484

Query: 378 RRDLFDVMVNLFDNALKFRRPDVVPEVTLKAAETLDASGLWCFTLSDNGIGLDPVHGAQI 437
             +L  +  NL  N +KF +  V P++ +   +  D    W F + DNGIG++     +I
Sbjct: 485 YTELRLLFQNLITNGIKFHQEGVPPKIQIGVTKKADH---WLFCIKDNGIGIENKFKERI 541

Query: 438 FALFRRLHGADRYPGTGVGLAICRRIVEQHGGTIFVESAPGVGTRFHFTLP 488
           F +F+RLH  + Y GTG+GLA C++IVE HGG I+V S  G G+ F FT+P
Sbjct: 542 FIIFQRLHTRNTYDGTGIGLAHCQKIVELHGGKIWVHSELGKGSSFLFTVP 592