Pairwise Alignments

Query, 515 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 778 a.a., aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB from Escherichia coli BL21

 Score =  114 bits (284), Expect = 2e-29
 Identities = 103/391 (26%), Positives = 177/391 (45%), Gaps = 26/391 (6%)

Query: 116 DITQSERADAEMDRQRRFQQTLLDAIPLPVFLKDREDRYQGCNLAFETASGRSRAEILGQ 175
           +I + E    ++++Q  F ++ LDA P  VF ++ +  + GCN A E  +G+S  +++  
Sbjct: 139 EIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHL 198

Query: 176 RMEQVLRSENYDRHRAEEALVLREGRTRVWEAMEHDVSGRHKLISITASPYREPGDPTVR 235
           +   V   E   +    +  V R   +  +E       GR     I   PY +       
Sbjct: 199 KPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKR-H 257

Query: 236 GLIGVVSDITRRQRAEDALRASVVELTASNRELQHFAEIAAHDLQEPVRAVVSHCQ-LLE 294
           GL+G   DIT R+R +DAL         ++R+   F    +H+L+ P+  +V   + LL+
Sbjct: 258 GLMGFGRDITERKRYQDALE-------RASRDKTTFISTISHELRTPLNGIVGLSRILLD 310

Query: 295 RHLGDALDGPARDHMIFAITGARRMRDLI-QDLLIYARAGRDGQFHEVVDTADLAREVVS 353
             L    +   +   + A+T      D+I  D +   +   D Q    VD      ++ +
Sbjct: 311 TELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQ---PVDFTSFLADLEN 367

Query: 354 ALADEIAASGATIRIDP-LP---SVLGRRRDLFDVMVNLFDNALKFRRPDVVPEVTLKAA 409
             A +    G    ++P LP    V+     L  ++ NL  NA+KF +     +VT++  
Sbjct: 368 LSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQG---QVTVRV- 423

Query: 410 ETLDASGLWCFTLSDNGIGLDPVHGAQIFALFRRL---HGADRYPGTGVGLAICRRIVEQ 466
              D   +  F + D+GIG+      +IFA++ ++   HG     GTG+GLA+ RR+ + 
Sbjct: 424 -RYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAKN 482

Query: 467 HGGTIFVESAPGVGTRFHFTLPA-APSEEPD 496
            GG I V S  G G+ F  T+ A + +EE D
Sbjct: 483 MGGDITVTSEQGKGSTFTLTIHAPSVAEEVD 513



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 84  HSDGSPRVLLISAVPLFDAQSGDRQGWRGAAKDITQSERADAEMDRQRRFQQTLLDAI 141
           + DG      I  VP +D + G R G  G  +DIT+ +R    ++R  R + T +  I
Sbjct: 234 YPDGRKACFEIRKVPYYD-RVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTI 290