Pairwise Alignments

Query, 231 a.a., GTP-binding (NCBI) from Rhodospirillum rubrum S1H

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 8/183 (4%)

Query: 49  DHDLSEIAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQELNYFRLGPEAQDPALMMV 108
           + D  +IA  GR NVGKS+LVN + G + +    + PG T++  Y     E        +
Sbjct: 189 EKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRDSIYIPF--ERDGEKYTFI 245

Query: 109 DLPGYGFAEAPKDAVKRWTRLIMAYLRGRPALRRVCLLIDSRHGIKENDRDVMRMLDEAA 168
           D  G        + V++++  ++  L+       V  ++D+R G+ ++D +++    EA 
Sbjct: 246 DTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFALEAG 303

Query: 169 VSYQIVLTKADKLKAAEITDVLARVVAETAKHVAAHPDVIVTSSQSGAGI-DLLRAQLAA 227
            +  I L K D ++  E   V  +   E         D+   S+  G G+ +L ++  AA
Sbjct: 304 RAIVIALNKWDGMEPGERAYV--KTELERRLFFVDFADIHFISALHGTGVGNLYKSVQAA 361

Query: 228 LAS 230
             S
Sbjct: 362 FQS 364



 Score = 32.0 bits (71), Expect = 2e-05
 Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 8/127 (6%)

Query: 55  IAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQELNYFRLGPEAQDPALMMVDLPGYG 114
           IA  GR NVGKS++ N LT  +  A   +  G T++  Y       Q  + +++D  G  
Sbjct: 5   IALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQYG--DASWQGRSFILIDTGGIT 61

Query: 115 FAEAPKDAVKRWTRLIMAYLRGRPALRRVCLLIDSRHGIKENDRDVMRMLDEAAVSYQIV 174
             E   D      ++    L        V  L+D+R G+   D+ +   L +   +  +V
Sbjct: 62  GDEVGMD-----EKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILV 116

Query: 175 LTKADKL 181
             K D +
Sbjct: 117 ANKIDNI 123