Pairwise Alignments

Query, 346 a.a., Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 863 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 55.1 bits (131), Expect = 7e-12
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 21/168 (12%)

Query: 191 AGAPAPSPRLARV-RVADL-LGRVVDHLAAAHPGVTWRLDTPESLVLKGDEAHLFRILVS 248
           +G P  +  LA V ++A   LG +++   AA   VT     P    ++G+E  L R+  +
Sbjct: 702 SGTPPAAVNLAEVVKLAQANLGALIEETGAA---VTVAEGLP---TVRGNEVELERLFQN 755

Query: 249 LGRNAAQVGSRS------VALRAERGEGWVFLDVIDDGPGVDPLTRDSLFQAFAGPSR-- 300
           L  NA +  ++       +  RA   E W+ + V D+G G+D   R  LFQ F    R  
Sbjct: 756 LISNAVKFQAQGRLPLVEITWRATADE-WI-ISVRDNGIGIDEAGRQKLFQIFQRLVRLD 813

Query: 301 --PGAAGVGLAVARDLARAQGGDLALVDGTIEGATFRLSLPAAGKPSS 346
             PG+ G+GLA  R +A   GG + +     EG+TF+++LP +G   S
Sbjct: 814 QYPGS-GIGLASCRKIAEHHGGRIWVESQPGEGSTFQVALPVSGPDES 860