Pairwise Alignments

Query, 496 a.a., Cytochrome c oxidase cbb3-type, subunit I (NCBI) from Rhodospirillum rubrum S1H

Subject, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

 Score =  620 bits (1598), Expect = 0.0
 Identities = 288/466 (61%), Positives = 358/466 (76%), Gaps = 7/466 (1%)

Query: 21  VIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTSFGRLRPLHTSAVVFAFGGNV 80
           V+++F I  V+WG++G   G  IA QL +P LN+DL WTSFGRLRPLHT+ V+FAFGG  
Sbjct: 14  VVRQFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPLHTNLVIFAFGGCA 73

Query: 81  LLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAALGYVLGVTQGKEYAEPEWFVD 140
           L GTS YVVQRT +  L   + +    FWG+Q  IV A +   +G T  KEYAE EW + 
Sbjct: 74  LFGTSYYVVQRTCQTRLISDS-MAAFTFWGWQAVIVGALITLPMGYTTTKEYAELEWPLA 132

Query: 141 LFLTVVWVLYLAAFLGTLLKRREPHIYVANWFFLAMIITIALLHLGNNMAIPVALMGGDS 200
           + L +VWV Y   F GT++KR+  HIYV NWF+ A I+  A+LH+ N++++PV+L     
Sbjct: 133 ILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHISLPVSLF---- 188

Query: 201 WVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYFVPKQAQRPVYSYRLSIVHFW 260
             KSY  YSG  DAM QWWYGHNAVGFFLT GFLG+MYYFVPKQA+RP+YSYRLSIVHFW
Sbjct: 189 --KSYSAYSGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFW 246

Query: 261 ALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMTLSGAWDKLRTDP 320
           ALI LYIWAGPHHLHYTALPDWAQ++GMV S++L  PSWGGMING+MTLSGAW KLRTDP
Sbjct: 247 ALITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTLSGAWHKLRTDP 306

Query: 321 VLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAFVSFGALYYL 380
           +LRFLVVS+ FYGMSTFEGPMM+IK VNSLSHYTDWTIGHVH+GALGWVA +S GA+Y++
Sbjct: 307 ILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAVYHM 366

Query: 381 VPALWKRRSLYSLKLVSLHFWIATLGIVLYITSMWVSGIMQGLMWRAYDELGFLQYSFIE 440
           +P L+ R  ++S+ L++ HFW+AT+G VLYI SMWV+GI QGLMWRA ++ G L YSF+E
Sbjct: 367 IPKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVE 426

Query: 441 SVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTIKGDIREDAPQAA 486
           ++ A HP YI+RA GG  F  G ++M YN++RT++      A +AA
Sbjct: 427 ALQASHPGYIVRALGGAFFASGMLLMAYNVFRTVRAANPAQAEEAA 472