Pairwise Alignments

Query, 496 a.a., Cytochrome c oxidase cbb3-type, subunit I (NCBI) from Rhodospirillum rubrum S1H

Subject, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 83/378 (21%), Positives = 158/378 (41%), Gaps = 39/378 (10%)

Query: 71  AVVFAFGGNVLLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFI--VMAALGYVLGVTQ 128
           + +F+ GG    G + Y    T+    Y  A++   IF  + + I  +M A+  +  +  
Sbjct: 132 STLFSPGGGPNFGWTFYAPLSTT----YAPASVTFFIFAIHLMGISSIMGAINVIATILN 187

Query: 129 GKEYAEPEWFVDLFLTVVWVLYLAAFLGTLLKRREPHIYVANWFFLAMIITIALLHLGNN 188
            +        + LF   VW   + AFL            +A    LA ++T+ L+ +   
Sbjct: 188 LRAPGMTLMKMPLF---VWTWLITAFL-----------LIAVMPVLAGVVTMMLMDIHFG 233

Query: 189 MAIPVALMGGDSWVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYFVPKQAQRP 248
            +   A  GGD  +  + F          W++GH  V   +   F G +   +P  +++P
Sbjct: 234 TSFFSAAGGGDPVLFQHVF----------WFFGHPEVYIMILPAF-GAVSSIIPAFSRKP 282

Query: 249 VYSYRLSIVHFWALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMT 308
           ++ Y   +    A+ FL      HH+    +P   +   M  ++++ +P+   + N + T
Sbjct: 283 LFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVST 342

Query: 309 LSGAWD-KLRTDPVLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALG 367
           +   W+  L  +  + F +  V  + +  F G M++I   +   H T + + H H   + 
Sbjct: 343 M---WEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVP 399

Query: 368 WVAFVSFGALYYLVPALWKRRSLYSLKLVSLHFWIATLGIVLYITSMWVSGIMQGLMWRA 427
              F  F + YY +P  W    +Y   L  LHFW++ +G+ +    M   G + G+  R 
Sbjct: 400 GAIFGIFASAYYWLPK-WTGH-MYDETLGKLHFWLSFVGMNMAFFPMHFVG-LAGMPRRI 456

Query: 428 YD-ELGFLQYSFIESVAA 444
            D  L F  ++ + S+ A
Sbjct: 457 PDYNLQFADFNMVSSIGA 474