Pairwise Alignments

Query, 273 a.a., OmpA/MotB (NCBI) from Rhodospirillum rubrum S1H

Subject, 344 a.a., Outer membrane porin F from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 10/157 (6%)

Query: 117 AAKAQTSFDCWAEEAEEDRQPEHIRECKQNFEIAMNALGGAPAPA-VVSEGFKVFFALDS 175
           AA A  +  C   +++ D   +++ +C            G PA A VV     V F  D 
Sbjct: 185 AAPAPVAEVC--SDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDK 242

Query: 176 ARLSPESEATLDRVSQAFLSGSPASVMVVGYADTSGPADYNILLSQRRAEAVARGLAQR- 234
           + + P S   +  ++         + +V G+ D+ GP  YN  LS+RRA AV + L Q+ 
Sbjct: 243 SVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQY 302

Query: 235 GIASEVLTLEAYGEERLAVPTADGVVEQ---QNRRVE 268
           G+ S  +    YGE R   P AD   E+    NRRVE
Sbjct: 303 GVESSRVDSVGYGETR---PVADNATEEGRAVNRRVE 336