Pairwise Alignments

Query, 295 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  145 bits (365), Expect = 1e-39
 Identities = 92/293 (31%), Positives = 156/293 (53%), Gaps = 16/293 (5%)

Query: 15  QVLIGLINGSFYAVLSLGLALIFGLLNIINFTHGAFYMLGAF---VSWWLLRILGIGYWP 71
           Q++ GL  GS Y ++++G  +++G++ +INF HG  YM+ A+   +S  LL   GI  +P
Sbjct: 8   QLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFP 67

Query: 72  ALILAPL-----AVGLFGIVLERLLLKPLYKLDHLYGLLLTFGLALILEGALRQGYGVSG 126
            LIL  L       G++G V+ER+  KPL     L  L+   G++LIL+   +   G   
Sbjct: 68  LLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAK- 126

Query: 127 LPYAIPPSLQGAWNL----GFMFLPVYRGWVVLASAVVCLVVWLLIEKTRAGAVMRAATE 182
               IP  L GAW +    GF+ L   + ++++A+     ++  +I+ T+ G + RA  +
Sbjct: 127 -QQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRATQQ 185

Query: 183 NPTLVKAFGINVPLLVTATYGLGAALAAFAGVLAAPIYSVNPLMGSNLI-IVVFAVVVIG 241
           +  +    GIN   +++  + +GAA+AA AGVL    Y         +I I  F   V+G
Sbjct: 186 DRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAAVLG 245

Query: 242 GMGSILGAVLTGFALGVIEGL-TKVVYPEASATVVFVIMALVLLVKPAGLFGR 293
           G+GS+ GA+L G  LG+ E L + ++  +      F ++ ++L+ +P GL GR
Sbjct: 246 GIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGR 298