Pairwise Alignments

Query, 295 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 4e-38
 Identities = 86/291 (29%), Positives = 156/291 (53%), Gaps = 12/291 (4%)

Query: 15  QVLIGLINGSFYAVLSLGLALIFGLLNIINFTHGAFYMLGAF---VSWWLLRILGIGYWP 71
           Q++ GL  GS Y ++++G  +++G++ +INF HG  YM+ A+   +S  LL   G+  +P
Sbjct: 8   QLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESFP 67

Query: 72  ALILAPL-----AVGLFGIVLERLLLKPLYKLDHLYGLLLTFGLALILE--GALRQGYGV 124
            L+L  L       G++G  +ER+  KPL     L  L+   G++LIL+    + QG   
Sbjct: 68  LLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQ 127

Query: 125 SGLPYAIPPSLQGAWNLGFMFLPVYRGWVVLASAVVCLVVWLLIEKTRAGAVMRAATENP 184
            G+P  +  +++     GF+ L   + ++++A+ V   ++  +I+ T+ G + RA  ++ 
Sbjct: 128 QGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDR 187

Query: 185 TLVKAFGINVPLLVTATYGLGAALAAFAGVLAAPIYSVNPLMGSNLI-IVVFAVVVIGGM 243
            +    GIN   +++  + +GA +AA AGVL    Y         +I I  F   V+GG+
Sbjct: 188 KMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAVLGGI 247

Query: 244 GSILGAVLTGFALGVIEGL-TKVVYPEASATVVFVIMALVLLVKPAGLFGR 293
           GS+ GA+L G  LG+ E L + ++  +      F ++ ++L+ +P GL GR
Sbjct: 248 GSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGR 298