Pairwise Alignments

Query, 250 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 263 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  176 bits (446), Expect = 4e-49
 Identities = 99/248 (39%), Positives = 145/248 (58%), Gaps = 6/248 (2%)

Query: 5   VIETRNMSRAFKGFLAVNDVDLKVRRGTIHALIGPNGAGKTTCFNLITKFLQPTAGSVLL 64
           ++E   ++  F G  AV+D+  +V+ G I A+IGPNGAGK+T FN+I    +PT G++  
Sbjct: 10  LLEVEGLTCRFAGVTAVDDLSFRVKAGEIKAVIGPNGAGKSTLFNMIAGVTRPTDGAIKF 69

Query: 65  EGRDITRTPPARVARLGMVRSFQISAIFPHLSVAQNLRVALQRK-----LGTSFHFWRSA 119
           +G  + R P    AR G+ R+FQ   IF  +SV +N+ V    +     L    H     
Sbjct: 70  DGARVDRLPTHARARRGIARTFQNLQIFREMSVLENVMVGRHLRGRATTLSALLHIPSVG 129

Query: 120 RSLAVLDDEVAALLDRVGLSAFAAIPAGELAYGRKRVLEIATTLALDPKVLLLDEPMAGM 179
                ++    ALL+R GL+A A +PAG LA+G+ +VLE+A  LA +P++LLLDEP AG+
Sbjct: 130 AEERAMEATAMALLERFGLAAKAGLPAGSLAFGQMKVLELARALASEPRLLLLDEPAAGL 189

Query: 180 GAEDISRTAALIRKVAAD-RTVLMVEHNLSVVADLSDRITVLQRGRILAEGTYDQISTDP 238
              +  + A  IR +  D  TVL+VEHN+ +V  LS  I VL  GR +AEGT + +   P
Sbjct: 190 PHAEADKMAETIRDLNRDGMTVLLVEHNMRMVMSLSHDILVLNNGRRIAEGTAEDVRRHP 249

Query: 239 AVIEAYMG 246
            V+ AY+G
Sbjct: 250 EVLSAYLG 257