Pairwise Alignments

Query, 358 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 339 a.a., putative Iron ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  194 bits (492), Expect = 4e-54
 Identities = 140/344 (40%), Positives = 189/344 (54%), Gaps = 14/344 (4%)

Query: 17  RAIPRTALGGALCLVVTLTLISFAIGPYGVAPGKVLAILASRALPGLAQALSLSWTPEDE 76
           R +P  A+  AL  ++   L   AIG   ++P  V  +LA+     L QA +    P D 
Sbjct: 4   RLLPCIAV--ALAALLAALLAGTAIGETNLSPSVVGQVLANH----LWQA-AYPVDPIDA 56

Query: 77  VVVMAIRLPRILGALLVGAALATSGATFQGLFRNPLVSPDLLGAAAGAGCAAAAGLLLGL 136
            +V   RL R L A   GA LAT G   Q + RNPL  P LLG +AGA   A    LLGL
Sbjct: 57  GIVWNYRLTRTLVAAACGAGLATCGVILQAMLRNPLAEPYLLGLSAGASTGAVLVGLLGL 116

Query: 137 GGPAIQ--GLAFLGGLAAVGLTCLIAKGRGGAGDGPLMMVLTGLIVGTVFSAFIGLIKTL 194
           G  A+     AF+G  AA  L  ++A+  G + +    ++L G+    +F+A    + T 
Sbjct: 117 GSLALSMSAGAFIGAGAAFALVLVLARAAGPSSNNA-QVILAGIAGSQLFNALTAFLITK 175

Query: 195 ADPDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWR-LNALAFGDDEARA 253
           +        I FWL+G+LS +    + LA P    G+ L CL   R L+A  FG D A +
Sbjct: 176 SATAEQARGILFWLLGNLSGVRWPSVWLAVPVAVFGL-LVCLWHRRALDAFTFGADSAAS 234

Query: 254 LGIDVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGPNHAVLLPACALLG 313
           LGI V R +L  I  A L+TA  V+I G IG VGLV+PH  R+LLGP H+ LLPA AL G
Sbjct: 235 LGIPVRRTQLLLISCAALVTAVMVSIVGAIGFVGLVIPHALRLLLGPGHSRLLPASALGG 294

Query: 314 GAFLLGVDDLARSLGPTE-IPLGILTALIGAPLFLALLPGARRG 356
             FL+  D L+R+L   + IP+G++TALIGAP+F AL+  +RRG
Sbjct: 295 ALFLIVADILSRTLITGQVIPVGVVTALIGAPVF-ALILVSRRG 337