Pairwise Alignments

Query, 778 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  171 bits (434), Expect = 1e-46
 Identities = 102/238 (42%), Positives = 142/238 (59%), Gaps = 8/238 (3%)

Query: 537 KEAAEFANRAKSEFLTNMSHELRTPLNAIIGFSEVLHSEMFGPLGATQYLDYAASIRDSG 596
           KEA E A+R KSEFL NMSHE+RTPLN I+GF+ +L      P    + LDY  +I  S 
Sbjct: 277 KEALE-ASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTP----RQLDYLNTIEKSA 331

Query: 597 RHLLDVINDILDVSRIEAGRATLFPEPLDFAEIVASVHRLVNQRAEAAGVRLKITLDPAL 656
            +LL +IN+ILD S+IEAG+  L   P +  +++     ++   A A  + L   +    
Sbjct: 332 DNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDT 391

Query: 657 PP-LLGEARRLKQVLINLLGNAIKFTPAGGEIALSARGDE--DKGQMVIEVSDSGIGMAP 713
           P  L+G+  RLKQ+L NL+ NAIKFT  G  +  +   DE  D  Q+ I V D+GIG++P
Sbjct: 392 PASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSP 451

Query: 714 EDIPLALEPFRQIDGQLARRYEGTGLGLPLSKAFVELHGGTLRVDSTPGAGTRITVRL 771
           +D+    + F Q D  LAR+  GTGLGL +SK  +E  GG + VDSTPG G++  + L
Sbjct: 452 QDVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISL 509