Pairwise Alignments

Query, 359 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 392 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score =  229 bits (585), Expect = 7e-65
 Identities = 140/313 (44%), Positives = 182/313 (58%), Gaps = 17/313 (5%)

Query: 4   LSLDGVSRQFGARTAVDRVSLTLEPGTFLALLGPSGCGKTTLLRLIAGFDRPDGGTITLG 63
           +  + V ++FG  TAV+ VSL +    F ALLGPSGCGKTTL+R++AGF+ P  G +TL 
Sbjct: 34  IRFENVVKRFGDFTAVNNVSLDIYEREFFALLGPSGCGKTTLMRMLAGFEEPSSGRLTLA 93

Query: 64  DGIVASDTAFVPPERRGVGMVFQSYALWPHMTVAENVAYALKIRGVARAERARIVQRCLD 123
                 D A VPP RR V M+FQSYAL+PHM VA+N+A+ LK   + +A+    V+  L 
Sbjct: 94  ----GEDLAGVPPYRRPVNMMFQSYALFPHMNVADNIAFGLKQDKMPKADIDARVEEMLT 149

Query: 124 QVGLGTLGGRLPAALSGGQRQRVALARCLAMNPAILLLDEPLANLDAHLRESMQREFRAF 183
            V L     R P  LSGGQRQRVALAR LA  P +LLLDEPL  LD  LRE  Q E    
Sbjct: 150 LVKLEKFAKRKPHQLSGGQRQRVALARSLAKRPKVLLLDEPLGALDKKLREETQFELMDL 209

Query: 184 HAKTGATMVYVTHDQAEALSLADKVAVMDGGVLQQVATPAELYRRPATDMVARFVGRGMV 243
               G T + VTHDQ EA+++AD++AVM+ GVL QV  PAE+Y +PAT  +A F+G   +
Sbjct: 210 QMDLGMTFLIVTHDQEEAMTVADRIAVMNHGVLVQVDPPAEIYEQPATRYIADFIGEVNL 269

Query: 244 LPAHLGRATAGGGAVAATLFGQAISVDSPAHP-----AGPARLCLRSEDLSLTGPDTPEG 298
           + +     TA  G V         S  + AHP      G A + +R E L ++    PEG
Sbjct: 270 IES---TVTACEGDVTRLTSDVTTSPLTVAHPCEVAAGGNACIAIRPEKLRISLDPPPEG 326

Query: 299 LGCTVCDTVFHGD 311
                 + VF G+
Sbjct: 327 -----SENVFAGE 334